RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ASPRV1Q53RT3 343 aa24.21■■□□□ 1.47
SDCBP-209ENST00000522243 IFIT1BQ5T764 474 aaKnown RBP24.21■■□□□ 1.47
SDCBP-209ENST00000522243 ADGRF4Q8IZF3 695 aa24.21■■□□□ 1.47
SDCBP-209ENST00000522243 DEFB123Q8N688 67 aa24.21■■□□□ 1.47
SDCBP-209ENST00000522243 MYH6P13533 1939 aa24.21■■□□□ 1.47
SDCBP-209ENST00000522243 A0A0U1RQG5 324 aaPredicted RBP24.2■■□□□ 1.46
SDCBP-209ENST00000522243 DHX16O60231 1041 aaKnown RBP24.2■■□□□ 1.46
SDCBP-209ENST00000522243 CDK7P50613 346 aa24.2■■□□□ 1.46
SDCBP-209ENST00000522243 FSCN1Q16658 493 aaKnown RBP24.2■■□□□ 1.46
SDCBP-209ENST00000522243 GPR153Q6NV75 609 aa24.2■■□□□ 1.46
SDCBP-209ENST00000522243 CXCL17Q6UXB2 119 aa24.2■■□□□ 1.46
SDCBP-209ENST00000522243 ARVCFO00192 962 aa24.19■■□□□ 1.46
SDCBP-209ENST00000522243 CYP21A2P08686 494 aa24.19■■□□□ 1.46
SDCBP-209ENST00000522243 SEC23AQ15436 765 aa24.19■■□□□ 1.46
SDCBP-209ENST00000522243 STAG2Q8N3U4 1231 aa24.19■■□□□ 1.46
SDCBP-209ENST00000522243 TBC1D5Q92609 795 aa24.19■■□□□ 1.46
SDCBP-209ENST00000522243 SZT2Q5T011 3432 aa24.18■■□□□ 1.46
SDCBP-209ENST00000522243 MROH7Q68CQ1 1323 aa24.18■■□□□ 1.46
SDCBP-209ENST00000522243 EPHB4P54760 987 aa24.18■■□□□ 1.46
SDCBP-209ENST00000522243 TRDNQ13061 729 aa24.18■■□□□ 1.46
SDCBP-209ENST00000522243 QRICH1Q2TAL8 776 aa24.18■■□□□ 1.46
SDCBP-209ENST00000522243 WDR11Q9BZH6 1224 aa24.18■■□□□ 1.46
SDCBP-209ENST00000522243 TAF6LQ9Y6J9 622 aa24.18■■□□□ 1.46
SDCBP-209ENST00000522243 U3KPZ7 1027 aaPredicted RBP24.18■■□□□ 1.46
SDCBP-209ENST00000522243 SGSM2O43147 1006 aa24.17■■□□□ 1.46
SDCBP-209ENST00000522243 PDE4DQ08499 809 aa24.17■■□□□ 1.46
SDCBP-209ENST00000522243 DUSP28Q4G0W2 176 aa24.17■■□□□ 1.46
SDCBP-209ENST00000522243 JMJD4Q9H9V9 463 aa24.17■■□□□ 1.46
SDCBP-209ENST00000522243 ABCB11O95342 1321 aa24.16■■□□□ 1.46
SDCBP-209ENST00000522243 LOC102724159A0A0B4J2E5 919 aa24.16■■□□□ 1.46
SDCBP-209ENST00000522243 PWP2Q15269 919 aaKnown RBP24.16■■□□□ 1.46
SDCBP-209ENST00000522243 FAM126BQ8IXS8 530 aa24.16■■□□□ 1.46
SDCBP-209ENST00000522243 TBX21Q9UL17 535 aa24.16■■□□□ 1.46
SDCBP-209ENST00000522243 Q9Y3F1 56 aa24.16■■□□□ 1.46
SDCBP-209ENST00000522243 ZEB2O60315 1214 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 PSMC6P62333 389 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 FPGSQ05932 587 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 CHST3Q7LGC8 479 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 FBXO11Q86XK2 927 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 DNERQ8NFT8 737 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 MPHOSPH6Q99547 160 aaKnown RBP24.15■■□□□ 1.46
SDCBP-209ENST00000522243 PPP1R12CQ9BZL4 782 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 SENP2Q9HC62 589 aa24.15■■□□□ 1.46
SDCBP-209ENST00000522243 RBM47A0AV96 593 aaKnown RBP24.14■■□□□ 1.45
SDCBP-209ENST00000522243 E7EWF7 191 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 IFIT3O14879 490 aaKnown RBP24.14■■□□□ 1.45
SDCBP-209ENST00000522243 TLR3O15455 904 aaKnown RBP24.14■■□□□ 1.45
SDCBP-209ENST00000522243 CABYRO75952 493 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 TIMP1P01033 207 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 ITGA7Q13683 1181 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 STOX1Q6ZVD7 989 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 RALYLQ86SE5 291 aaKnown RBP24.14■■□□□ 1.45
SDCBP-209ENST00000522243 TAAR1Q96RJ0 339 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 MTMR10Q9NXD2 777 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 COL20A1Q9P218 1284 aa24.14■■□□□ 1.45
SDCBP-209ENST00000522243 GRIN2DO15399 1336 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 KLRF2D3W0D1 207 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 EDNRBP24530 442 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 RGS22Q8NE09 1264 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 OR6J1Q8NGC5 347 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 NCOA7Q8NI08 942 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 SYTL5Q8TDW5 730 aaPredicted RBP24.13■■□□□ 1.45
SDCBP-209ENST00000522243 COPS5Q92905 334 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 FAM161BQ96MY7 647 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 MAD2L2Q9UI95 211 aa24.13■■□□□ 1.45
SDCBP-209ENST00000522243 MAP4K1Q92918 833 aa24.12■■□□□ 1.45
SDCBP-209ENST00000522243 RNPC3Q96LT9 517 aaKnown RBP24.12■■□□□ 1.45
SDCBP-209ENST00000522243 MRPL11Q9Y3B7 192 aaKnown RBP24.12■■□□□ 1.45
SDCBP-209ENST00000522243 RBM8AQ9Y5S9 174 aaKnown RBP24.12■■□□□ 1.45
SDCBP-209ENST00000522243 ERICH2A1L162 156 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 PALM3A6NDB9 673 aaPredicted RBP24.11■■□□□ 1.45
SDCBP-209ENST00000522243 B4DLN1 442 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 CD4P01730 458 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 MYL3P08590 195 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 MRPL12P52815 198 aaKnown RBP24.11■■□□□ 1.45
SDCBP-209ENST00000522243 PPP2R5BQ15173 497 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 MFSD5Q6N075 450 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 SKAP1Q86WV1 359 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 MCF2L2Q86YR7 1114 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 SLC43A3Q8NBI5 491 aa24.11■■□□□ 1.45
SDCBP-209ENST00000522243 WTAPQ15007 396 aa24.1■■□□□ 1.45
SDCBP-209ENST00000522243 SCFD2Q8WU76 684 aa24.1■■□□□ 1.45
SDCBP-209ENST00000522243 AMNQ9BXJ7 453 aa24.1■■□□□ 1.45
SDCBP-209ENST00000522243 LAMA3Q16787 3333 aa24.1■■□□□ 1.45
SDCBP-209ENST00000522243 PPP1R11O60927 126 aaPredicted RBP24.09■■□□□ 1.45
SDCBP-209ENST00000522243 ARIH2O95376 493 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 CFBP00751 764 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 TXNP10599 105 aaKnown RBP24.09■■□□□ 1.45
SDCBP-209ENST00000522243 CSF2RAP15509 400 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 CYP2C18P33260 490 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 ANTXR2P58335 489 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 GRM4Q14833 912 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 SLC35G1Q2M3R5 365 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 SEPT14Q6ZU15 432 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 HOMER1Q86YM7 354 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 MTMR8Q96EF0 704 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 TRPV6Q9H1D0 765 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 POLR3EQ9NVU0 708 aa24.09■■□□□ 1.45
SDCBP-209ENST00000522243 B4GALT4O60513 344 aa24.08■■□□□ 1.45
SDCBP-209ENST00000522243 CPT1AP50416 773 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms