RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 SEC63Q9UGP8 760 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 MRPL11Q9Y3B7 192 aaKnown RBP9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 PCDHA1Q9Y5I3 950 aa9.7□□□□□ -0.86
CTNNA1-231ENST00000521941 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 ZBTB43O43298 467 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 ADCY6O43306 1168 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 PTGS1P23219 599 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 RPS6KB1P23443 525 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 PSMA5P28066 241 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 ADCYAP1R1P41586 468 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 GNAQP50148 359 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 MNX1P50219 401 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 EXOSC10Q01780 885 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 PDE4DQ08499 809 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 RTN1Q16799 776 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 CCDC144BQ3MJ40 725 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 PDE4DIPQ5VU43 2346 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 UBE2Q1Q7Z7E8 422 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 SGMS1Q86VZ5 419 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 SRBD1Q8N5C6 995 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 KCNB2Q92953 911 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 MTMR8Q96EF0 704 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 RRP36Q96EU6 259 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 USP26Q9BXU7 913 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 UPF3BQ9BZI7 483 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 SENP6Q9GZR1 1112 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 ABHD16BQ9H3Z7 469 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 NRBP1Q9UHY1 535 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 BRPF3Q9ULD4 1205 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 FAM184BQ9ULE4 1060 aa9.69□□□□□ -0.86
CTNNA1-231ENST00000521941 CNTNAP5Q8WYK1 1306 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 SYNRGQ9UMZ2 1314 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 PNMA6FA0A0J9YX94 578 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 C6orf222P0C671 652 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 EIF2AK2P19525 551 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 HOXA13P31271 388 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 METAP2P50579 478 aaKnown RBP eCLIP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 LRRC41Q15345 812 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 TMTC3Q6ZXV5 915 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 FCHSD1Q86WN1 690 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 MCF2L2Q86YR7 1114 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 C7orf61Q8IZ16 206 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 FANCBQ8NB91 859 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 ARRDC4Q8NCT1 418 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 SYTL5Q8TDW5 730 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 FERMT2Q96AC1 680 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 TAAR1Q96RJ0 339 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 MPHOSPH6Q99547 160 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 MAP3K14Q99558 947 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 LARP6Q9BRS8 491 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 SPZ1Q9BXG8 430 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 PDGFCQ9NRA1 345 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 COL20A1Q9P218 1284 aa9.68□□□□□ -0.86
CTNNA1-231ENST00000521941 MYADML2A6NDP7 307 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 DNM1LO00429 736 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 OPLAHO14841 1288 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 EVI5O60447 810 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 CAPN2P17655 700 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 CDC27P30260 824 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 TNFAIP2Q03169 654 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 ARHGEF16Q5VV41 709 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 RUFY3Q7L099 469 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 HEATR3Q7Z4Q2 680 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 RNF180Q86T96 592 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 GPKOWQ92917 476 aaPredicted RBP eCLIP9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 RMDN3Q96TC7 470 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 LZTS2Q9BRK4 669 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 KATNBL1Q9H079 304 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 VTA1Q9NP79 307 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 CYP46A1Q9Y6A2 500 aa9.67□□□□□ -0.86
CTNNA1-231ENST00000521941 GCOM1H8Y6P7 765 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 EPB41L2O43491 1005 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 PPFIA3O75145 1194 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 ADAMTS4O75173 837 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 DUSP11O75319 330 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 POLR2MP0CAP2 368 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 MYCLP12524 364 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 CCT2P78371 535 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 BEX3Q00994 111 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 TRAF1Q13077 416 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 LRRC26Q2I0M4 334 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 TMEM63BQ5T3F8 832 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 PRPF38BQ5VTL8 546 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 TLK2Q86UE8 772 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 DNERQ8NFT8 737 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 SPC25Q9HBM1 224 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 ZMYND8Q9ULU4 1186 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 KIAA1217Q5T5P2 1943 aa9.66□□□□□ -0.86
CTNNA1-231ENST00000521941 B4DLN1 442 aa9.65□□□□□ -0.86
CTNNA1-231ENST00000521941 H0YGN5 161 aa9.65□□□□□ -0.86
CTNNA1-231ENST00000521941 DYNC1LI2O43237 492 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-231ENST00000521941 SEC24BO95487 1268 aa9.65□□□□□ -0.86
CTNNA1-231ENST00000521941 COL6A1P12109 1028 aa9.65□□□□□ -0.86
CTNNA1-231ENST00000521941 SMPD1P17405 629 aa9.65□□□□□ -0.86
CTNNA1-231ENST00000521941 SYN1P17600 705 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms