RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 NID2Q14112 1375 aa21.07■□□□□ 0.96
VEGFA-222ENST00000520948 SMCHD1A6NHR9 2005 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 SLC25A27O95847 323 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 PDIA3P30101 505 aaKnown RBP21.06■□□□□ 0.96
VEGFA-222ENST00000520948 GNAQP50148 359 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 PPP2R5BQ15173 497 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 LRRC41Q15345 812 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 MICU3Q86XE3 530 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 CPXCR1Q8N123 301 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 SRBD1Q8N5C6 995 aaKnown RBP21.06■□□□□ 0.96
VEGFA-222ENST00000520948 AGBL1Q96MI9 1066 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 LZTS2Q9BRK4 669 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 SPZ1Q9BXG8 430 aa21.06■□□□□ 0.96
VEGFA-222ENST00000520948 PLEKHA8P1O95397 391 aa21.05■□□□□ 0.96
VEGFA-222ENST00000520948 ICAM1P05362 532 aa21.05■□□□□ 0.96
VEGFA-222ENST00000520948 CDC27P30260 824 aa21.05■□□□□ 0.96
VEGFA-222ENST00000520948 AK2P54819 239 aa21.05■□□□□ 0.96
VEGFA-222ENST00000520948 FUT2Q10981 343 aa21.05■□□□□ 0.96
VEGFA-222ENST00000520948 SNRNP48Q6IEG0 339 aaKnown RBP21.05■□□□□ 0.96
VEGFA-222ENST00000520948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.05■□□□□ 0.965e-6■□□□□ 9.9
VEGFA-222ENST00000520948 CCDC144CPQ8IYA2 1237 aa21.05■□□□□ 0.96
VEGFA-222ENST00000520948 CTDP1Q9Y5B0 961 aaPredicted RBP21.05■□□□□ 0.96
VEGFA-222ENST00000520948 COPB2P35606 906 aa21.04■□□□□ 0.96
VEGFA-222ENST00000520948 SNX17Q15036 470 aa21.04■□□□□ 0.96
VEGFA-222ENST00000520948 CCDC174Q6PII3 467 aa21.04■□□□□ 0.96
VEGFA-222ENST00000520948 TMTC3Q6ZXV5 915 aa21.04■□□□□ 0.96
VEGFA-222ENST00000520948 GUCD1Q96NT3 240 aa21.04■□□□□ 0.96
VEGFA-222ENST00000520948 LARP6Q9BRS8 491 aaKnown RBP21.04■□□□□ 0.96
VEGFA-222ENST00000520948 VAT1LQ9HCJ6 419 aa21.04■□□□□ 0.96
VEGFA-222ENST00000520948 XPNPEP3Q9NQH7 507 aa21.04■□□□□ 0.96
VEGFA-222ENST00000520948 RBM28Q9NW13 759 aaKnown RBP21.04■□□□□ 0.96
VEGFA-222ENST00000520948 GOLGA8AA7E2F4 631 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 GOLGA8BA8MQT2 603 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 POTEB2H3BUK9 544 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 TAL1P17542 331 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-222ENST00000520948 KCTD2Q14681 263 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 ANKRD1Q15327 319 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 SHHQ15465 462 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 CDC37Q16543 378 aaPredicted RBP21.03■□□□□ 0.96
VEGFA-222ENST00000520948 RTN1Q16799 776 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 QRICH1Q2TAL8 776 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 TKFCQ3LXA3 575 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 C9orf50Q5SZB4 431 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 SH3RF1Q7Z6J0 888 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 BADQ92934 168 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 PDLIM7Q9NR12 457 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 TPCN1Q9ULQ1 816 aa21.03■□□□□ 0.96
VEGFA-222ENST00000520948 ZBTB5O15062 677 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 PGK1P00558 417 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 RARBP10826 455 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 ADD1P35611 737 aaKnown RBP21.02■□□□□ 0.96
VEGFA-222ENST00000520948 METAP2P50579 478 aaKnown RBP eCLIP21.02■□□□□ 0.967e-12■□□□□ 8.9
VEGFA-222ENST00000520948 CMTR1Q8N1G2 835 aaKnown RBP21.02■□□□□ 0.96
VEGFA-222ENST00000520948 CHST13Q8NET6 341 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 IL27Q8NEV9 243 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 LENG1Q96BZ8 264 aaPredicted RBP21.02■□□□□ 0.96
VEGFA-222ENST00000520948 PIGSQ96S52 555 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 TINF2Q9BSI4 451 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 PNMA2Q9UL42 364 aa21.02■□□□□ 0.96
VEGFA-222ENST00000520948 LAMA2P24043 3122 aaKnown RBP21.02■□□□□ 0.95
VEGFA-222ENST00000520948 TRIM43BA6NCK2 446 aa21.01■□□□□ 0.95
VEGFA-222ENST00000520948 PPP1R11O60927 126 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-222ENST00000520948 RABEP1Q15276 862 aa21.01■□□□□ 0.95
VEGFA-222ENST00000520948 NTRK3Q16288 839 aa21.01■□□□□ 0.95
VEGFA-222ENST00000520948 ZNF792Q3KQV3 632 aa21.01■□□□□ 0.95
VEGFA-222ENST00000520948 FAM109BQ6ICB4 259 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-222ENST00000520948 TRIM43Q96BQ3 446 aaPredicted RBP21.01■□□□□ 0.95
VEGFA-222ENST00000520948 CCPG1Q9ULG6 757 aa21.01■□□□□ 0.95
VEGFA-222ENST00000520948 MYH6P13533 1939 aa21.01■□□□□ 0.95
VEGFA-222ENST00000520948 BAZ2BQ9UIF8 2168 aaKnown RBP21■□□□□ 0.95
VEGFA-222ENST00000520948 PNMA6FA0A0J9YX94 578 aa21■□□□□ 0.95
VEGFA-222ENST00000520948 CCDC196A0A1B0GTZ2 297 aa21■□□□□ 0.95
VEGFA-222ENST00000520948 DHX16O60231 1041 aaKnown RBP21■□□□□ 0.95
VEGFA-222ENST00000520948 TLE2Q04725 743 aa21■□□□□ 0.95
VEGFA-222ENST00000520948 ZNF697Q5TEC3 545 aa21■□□□□ 0.95
VEGFA-222ENST00000520948 TRERF1Q96PN7 1200 aa21■□□□□ 0.95
VEGFA-222ENST00000520948 FBXO40Q9UH90 709 aa21■□□□□ 0.95
VEGFA-222ENST00000520948 NAP1L2Q9ULW6 460 aaPredicted RBP21■□□□□ 0.95
VEGFA-222ENST00000520948 PHF24Q9UPV7 400 aa21■□□□□ 0.95
VEGFA-222ENST00000520948 ALAS1P13196 640 aa20.99■□□□□ 0.95
VEGFA-222ENST00000520948 SLC4A3P48751 1232 aa20.99■□□□□ 0.95
VEGFA-222ENST00000520948 MUM1L1Q5H9M0 696 aa20.99■□□□□ 0.95
VEGFA-222ENST00000520948 FBXO11Q86XK2 927 aa20.99■□□□□ 0.95
VEGFA-222ENST00000520948 CLEC4DQ8WXI8 215 aa20.99■□□□□ 0.95
VEGFA-222ENST00000520948 NRBP1Q9UHY1 535 aa20.99■□□□□ 0.95
VEGFA-222ENST00000520948 CNTNAP5Q8WYK1 1306 aa20.99■□□□□ 0.95
VEGFA-222ENST00000520948 PFKFB2O60825 505 aa20.98■□□□□ 0.95
VEGFA-222ENST00000520948 ZNF865P0CJ78 1059 aaPredicted RBP20.98■□□□□ 0.95
VEGFA-222ENST00000520948 CCT2P78371 535 aaKnown RBP20.98■□□□□ 0.95
VEGFA-222ENST00000520948 ME3Q16798 604 aa20.98■□□□□ 0.95
VEGFA-222ENST00000520948 RNF180Q86T96 592 aa20.98■□□□□ 0.95
VEGFA-222ENST00000520948 CCDC82Q8N4S0 544 aa20.98■□□□□ 0.95
VEGFA-222ENST00000520948 RRP36Q96EU6 259 aaKnown RBP20.98■□□□□ 0.95
VEGFA-222ENST00000520948 AMNQ9BXJ7 453 aa20.98■□□□□ 0.95
VEGFA-222ENST00000520948 NCOA5Q9HCD5 579 aaKnown RBP20.98■□□□□ 0.95
VEGFA-222ENST00000520948 RNF146Q9NTX7 359 aa20.98■□□□□ 0.95
VEGFA-222ENST00000520948 DIS3Q9Y2L1 958 aaKnown RBP20.98■□□□□ 0.95
VEGFA-222ENST00000520948 A0A0C4DFX4 3053 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 AKR1A1P14550 325 aa20.97■□□□□ 0.95
VEGFA-222ENST00000520948 IFNAR1P17181 557 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms