RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 CUL5Q93034 780 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 ATG4CQ96DT6 458 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 ABHD8Q96I13 439 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 MS4A4AQ96JQ5 239 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 RCOR1Q9UKL0 485 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 MORC2Q9Y6X9 1032 aaPredicted RBP9.75□□□□□ -0.85
VAPB-206ENST00000520497 ABCB11O95342 1321 aa9.75□□□□□ -0.85
VAPB-206ENST00000520497 LOXHD1Q8IVV2 1947 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 PIK3CDO00329 1044 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 WNT7AO00755 349 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 ZBED4O75132 1171 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 MRPL12P52815 198 aaKnown RBP9.74□□□□□ -0.85
VAPB-206ENST00000520497 OAZ1P54368 228 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 HUNKP57058 714 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 UBE2HP62256 183 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 GHRHRQ02643 423 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 PTPAQ15257 358 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
VAPB-206ENST00000520497 UBE2SQ16763 222 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 SPRYD7Q5W111 196 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 ANO1Q5XXA6 986 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 POTEEQ6S8J3 1075 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 GADL1Q6ZQY3 521 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 PIK3AP1Q6ZUJ8 805 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 SPATA32Q96LK8 384 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 AGBL1Q96MI9 1066 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 PSTPIP2Q9H939 334 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.74□□□□□ -0.85
VAPB-206ENST00000520497 HOXC10Q9NYD6 342 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.74□□□□□ -0.85
VAPB-206ENST00000520497 BIN2Q9UBW5 565 aaPredicted RBP9.74□□□□□ -0.85
VAPB-206ENST00000520497 PNMA2Q9UL42 364 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 ZNF214Q9UL59 606 aaPredicted RBP9.74□□□□□ -0.85
VAPB-206ENST00000520497 CCPG1Q9ULG6 757 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 MRPL11Q9Y3B7 192 aaKnown RBP9.74□□□□□ -0.85
VAPB-206ENST00000520497 CLIC4Q9Y696 253 aa9.74□□□□□ -0.85
VAPB-206ENST00000520497 CCDC194A0A1B0GVG4 234 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 C19orf67A6NJJ6 358 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 EDIL3O43854 480 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 GTF2A2P52657 109 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 CEBPZQ03701 1054 aaKnown RBP9.73□□□□□ -0.85
VAPB-206ENST00000520497 AP3B2Q13367 1082 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 GSE1Q14687 1217 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 SLC39A14Q15043 492 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 NONOQ15233 471 aaKnown RBP eCLIP9.73□□□□□ -0.853e-10■■■■■ 27.6
VAPB-206ENST00000520497 JAKMIP3Q5VZ66 844 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 USP17L6PQ6QN14 398 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 RASAL3Q86YV0 1011 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 MB21D1Q8N884 522 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 P2RX7Q99572 595 aaKnown RBP9.73□□□□□ -0.85
VAPB-206ENST00000520497 ASCC2Q9H1I8 757 aaPredicted RBP9.73□□□□□ -0.85
VAPB-206ENST00000520497 RAVER2Q9HCJ3 691 aaKnown RBP9.73□□□□□ -0.85
VAPB-206ENST00000520497 TMEM260Q9NX78 707 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
VAPB-206ENST00000520497 SLC45A1Q9Y2W3 748 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 PCDHB6Q9Y5E3 794 aa9.73□□□□□ -0.85
VAPB-206ENST00000520497 MYH9P35579 1960 aaKnown RBP9.73□□□□□ -0.85
VAPB-206ENST00000520497 ZNF236Q9UL36 1845 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 SPTLC2O15270 562 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 PPP6R2O75170 966 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 GADD45BO75293 160 aaPredicted RBP9.72□□□□□ -0.85
VAPB-206ENST00000520497 BMP15O95972 392 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 CETPP11597 493 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 MAP2K2P36507 400 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 HSD17B4P51659 736 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 HERVK_113P62684 666 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
VAPB-206ENST00000520497 PABPC4Q13310 644 aaKnown RBP eCLIP9.72□□□□□ -0.85
VAPB-206ENST00000520497 TMEM132BQ14DG7 1078 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 INF2Q27J81 1249 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 TTC38Q5R3I4 469 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 MCTP2Q6DN12 878 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 CPXCR1Q8N123 301 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 SAMD3Q8N6K7 520 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 KCNG4Q8TDN1 519 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 TBCKQ8TEA7 893 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 CRYGNQ8WXF5 182 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 CLEC4DQ8WXI8 215 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 BRI3BPQ8WY22 251 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 PGBD1Q96JS3 809 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 TEX13BQ9BXU2 312 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 MAF1Q9H063 256 aa9.72□□□□□ -0.85
VAPB-206ENST00000520497 CCL15-CCL14A0A0B4J2E2 113 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 NFIBO00712 420 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 CNMDO75829 334 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 LETM1O95202 739 aaPredicted RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 FOSP01100 380 aaPredicted RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 ATP2C1P98194 919 aaPredicted RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 ORC2Q13416 577 aaPredicted RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 STK38Q15208 465 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 CCL15Q16663 113 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 TKFCQ3LXA3 575 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 MUM1L1Q5H9M0 696 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 SNRNP48Q6IEG0 339 aaKnown RBP9.71□□□□□ -0.86
VAPB-206ENST00000520497 ANKRD23Q86SG2 305 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 NEK8Q86SG6 692 aa9.71□□□□□ -0.86
VAPB-206ENST00000520497 GPT2Q8TD30 523 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms