RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 GRB10Q13322 594 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 CBX2Q14781 532 aaPredicted RBP7.08□□□□□ -1.28
SKP1-207ENST00000520417 IGDCC3Q8IVU1 814 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 CRACR2BQ8N4Y2 399 aaPredicted RBP7.08□□□□□ -1.28
SKP1-207ENST00000520417 LZTR1Q8N653 840 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.08□□□□□ -1.28
SKP1-207ENST00000520417 LGR4Q9BXB1 951 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 GPRC5CQ9NQ84 441 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 ACTR10Q9NZ32 417 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 CLEC1BQ9P126 229 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 LRP2BPQ9P2M1 347 aa7.08□□□□□ -1.28
SKP1-207ENST00000520417 TCF3P15923 654 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 LIMS1P48059 325 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 CORO7P57737 925 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 PRR5P85299 388 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 SCRN1Q12765 414 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 NCAPHQ15003 741 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 SV2CQ496J9 727 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 LILRA6Q6PI73 481 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 POMZP3Q6PJE2 187 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 C6orf15Q6UXA7 325 aaPredicted RBP7.07□□□□□ -1.28
SKP1-207ENST00000520417 TMEFF1Q8IYR6 380 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 BVESQ8NE79 360 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 PWWP2AQ96N64 755 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 BTG4Q9NY30 223 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 FAN1Q9Y2M0 1017 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 PCDHA5Q9Y5H7 936 aa7.07□□□□□ -1.28
SKP1-207ENST00000520417 SRGAP3O43295 1099 aa7.06□□□□□ -1.28
SKP1-207ENST00000520417 DDAH1O94760 285 aa7.06□□□□□ -1.28
SKP1-207ENST00000520417 RBM25P49756 843 aaKnown RBP7.06□□□□□ -1.28
SKP1-207ENST00000520417 LCE1DQ5T752 114 aa7.06□□□□□ -1.28
SKP1-207ENST00000520417 LCE4AQ5TA78 99 aa7.06□□□□□ -1.28
SKP1-207ENST00000520417 FAM129CQ86XR2 697 aa7.06□□□□□ -1.28
SKP1-207ENST00000520417 BCAS3Q9H6U6 928 aa7.06□□□□□ -1.28
SKP1-207ENST00000520417 EPB41L4AQ9HCS5 686 aaPredicted RBP7.06□□□□□ -1.28
SKP1-207ENST00000520417 TRBV23OR9-2A0A075B6M9 112 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 B2RBV5 119 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 IRS4O14654 1257 aaPredicted RBP7.05□□□□□ -1.28
SKP1-207ENST00000520417 NPHS1O60500 1241 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 FUCA1P04066 466 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 PLS3P13797 630 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 TARBP2Q15633 366 aaKnown RBP7.05□□□□□ -1.28
SKP1-207ENST00000520417 TTLL10Q6ZVT0 673 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 ALG3Q92685 438 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 DACT3Q96B18 629 aaPredicted RBP7.05□□□□□ -1.28
SKP1-207ENST00000520417 PARD6AQ9NPB6 346 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 EMC9Q9Y3B6 208 aa7.05□□□□□ -1.28
SKP1-207ENST00000520417 ETFBP38117 255 aa7.04□□□□□ -1.28
SKP1-207ENST00000520417 CTSWP56202 376 aa7.04□□□□□ -1.28
SKP1-207ENST00000520417 TNNI3KQ59H18 835 aa7.04□□□□□ -1.28
SKP1-207ENST00000520417 GTF2IRD2BQ6EKJ0 949 aa7.04□□□□□ -1.28
SKP1-207ENST00000520417 GTF2IRD2Q86UP8 949 aa7.04□□□□□ -1.28
SKP1-207ENST00000520417 FAM178BQ8IXR5 827 aa7.04□□□□□ -1.28
SKP1-207ENST00000520417 NLGN2Q8NFZ4 835 aa7.04□□□□□ -1.28
SKP1-207ENST00000520417 R3HCC1Q9Y3T6 440 aaKnown RBP7.04□□□□□ -1.28
SKP1-207ENST00000520417 C7orf72A4D263 438 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 TRIM13O60858 407 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 PPP1R11O60927 126 aaPredicted RBP7.03□□□□□ -1.28
SKP1-207ENST00000520417 SASH1O94885 1247 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 GLI4P10075 376 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 HOXA5P20719 270 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 DNAJA1P31689 397 aaKnown RBP7.03□□□□□ -1.28
SKP1-207ENST00000520417 ZNF143P52747 638 aaPredicted RBP7.03□□□□□ -1.28
SKP1-207ENST00000520417 ZNF513Q8N8E2 541 aaPredicted RBP7.03□□□□□ -1.28
SKP1-207ENST00000520417 MARCH2Q9P0N8 246 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 FBLN5Q9UBX5 448 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 NUDT5Q9UKK9 219 aa7.03□□□□□ -1.28
SKP1-207ENST00000520417 THBDP07204 575 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 MC3RP41968 323 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 ECI1P42126 302 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 KCNJ6P48051 423 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 ARID5AQ03989 594 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 TRIM59Q8IWR1 403 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 ZDHHC14Q8IZN3 488 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 NLGN1Q8N2Q7 840 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 MARCH10Q8NA82 808 aaPredicted RBP7.02□□□□□ -1.29
SKP1-207ENST00000520417 BTN2A2Q8WVV5 523 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 PRKAG3Q9UGI9 489 aa7.02□□□□□ -1.29
SKP1-207ENST00000520417 NTRK1P04629 796 aa7.01□□□□□ -1.29
SKP1-207ENST00000520417 SNRPB2P08579 225 aaKnown RBP7.01□□□□□ -1.29
SKP1-207ENST00000520417 NCAM1P13591 858 aa7.01□□□□□ -1.29
SKP1-207ENST00000520417 FOXO4P98177 505 aa7.01□□□□□ -1.29
SKP1-207ENST00000520417 FXNQ16595 210 aa7.01□□□□□ -1.29
SKP1-207ENST00000520417 PEX11GQ96HA9 241 aa7.01□□□□□ -1.29
SKP1-207ENST00000520417 SIT1Q9Y3P8 196 aa7.01□□□□□ -1.29
SKP1-207ENST00000520417 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
SKP1-207ENST00000520417 ADAMTS20P59510 1910 aa7□□□□□ -1.29
SKP1-207ENST00000520417 TBX1O43435 398 aa7□□□□□ -1.29
SKP1-207ENST00000520417 ITGAVP06756 1048 aa7□□□□□ -1.29
SKP1-207ENST00000520417 ASGR2P07307 311 aa7□□□□□ -1.29
SKP1-207ENST00000520417 ATF2P15336 505 aa7□□□□□ -1.29
SKP1-207ENST00000520417 MBLAC2Q68D91 279 aa7□□□□□ -1.29
SKP1-207ENST00000520417 WWC2Q6AWC2 1192 aa7□□□□□ -1.29
SKP1-207ENST00000520417 TEX2Q8IWB9 1127 aa7□□□□□ -1.29
SKP1-207ENST00000520417 FEZF2Q8TBJ5 459 aa7□□□□□ -1.29
SKP1-207ENST00000520417 COPS5Q92905 334 aa7□□□□□ -1.29
SKP1-207ENST00000520417 KCNC2Q96PR1 638 aa7□□□□□ -1.29
SKP1-207ENST00000520417 MTA3Q9BTC8 594 aa7□□□□□ -1.29
SKP1-207ENST00000520417 NKX2-4Q9H2Z4 354 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms