RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 OSBPL3Q9H4L5 887 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 A1CFQ9NQ94 594 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 STARD7Q9NQZ5 370 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 PNMA2Q9UL42 364 aa6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 GNEQ9Y223 722 aaKnown RBP6.69□□□□□ -1.34
CTNNA1-219ENST00000520158 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 RBM47A0AV96 593 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 TSPY2A6NKD2 308 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 ARVCFO00192 962 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 RAD21O60216 631 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 CABYRO75952 493 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 FGAP02671 866 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 ICAM1P05362 532 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 ASGR1P07306 291 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 RAG1P15918 1043 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 EPHB4P54760 987 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 RRP1P56182 461 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 CNTN2Q02246 1040 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 FPGSQ05932 587 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 NBR1Q14596 966 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 MCMDC2Q4G0Z9 681 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 ZNF697Q5TEC3 545 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 MFSD5Q6N075 450 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 TAPT1Q6NXT6 567 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 CCDC129Q6ZRS4 1044 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 FAM126BQ8IXS8 530 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 SMC5Q8IY18 1101 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 STK11IPQ8N1F8 1099 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 LRRC47Q8N1G4 583 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 RNF25Q96BH1 459 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 AGBL1Q96MI9 1066 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 TRERF1Q96PN7 1200 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 CDX2Q99626 313 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 RANBP17Q9H2T7 1088 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 PRDM5Q9NQX1 630 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 TMEM39AQ9NV64 488 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 CYP39A1Q9NYL5 469 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 PRDM4Q9UKN5 801 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 PRR12Q9ULL5 1215 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 CTDP1Q9Y5B0 961 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 ASTN1O14525 1302 aa6.68□□□□□ -1.34
CTNNA1-219ENST00000520158 LAMA2P24043 3122 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 MYADML2A6NDP7 307 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 STK25O00506 426 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 NMT2O60551 498 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 C6orf222P0C671 652 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 SNHG28P0DPA3 235 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 HSPD1P10809 573 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 TOP1P11387 765 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 TNFAIP2Q03169 654 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 CTDSPL2Q05D32 466 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 MUM1L1Q5H9M0 696 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 GNASQ5JWF2 1037 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 ANKRD45Q5TZF3 282 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 VPS53Q5VIR6 699 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 C16orf59Q7L2K0 433 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 HS6ST3Q8IZP7 471 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 FAM177A1Q8N128 213 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 GPATCH11Q8N954 259 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 RGS22Q8NE09 1264 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 ANKS1AQ92625 1134 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 LENG1Q96BZ8 264 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 TMEM47Q9BQJ4 181 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 TTYH1Q9H313 450 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 VTA1Q9NP79 307 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 INCENPQ9NQS7 918 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 RNF146Q9NTX7 359 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 ZHX1Q9UKY1 873 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 STX8Q9UNK0 236 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 LCTP09848 1927 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 A0A0C4DFX4 3053 aa6.67□□□□□ -1.34
CTNNA1-219ENST00000520158 TLR3O15455 904 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 RANBP6O60518 1105 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 PQBP1O60828 265 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 ALAS1P13196 640 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 SMPD1P17405 629 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 EDNRBP24530 442 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 PPIGQ13427 754 aaKnown RBP eCLIP6.66□□□□□ -1.342e-8■□□□□ 10.5
CTNNA1-219ENST00000520158 DUSP28Q4G0W2 176 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 TMEM240Q5SV17 173 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 AKNAD1Q5T1N1 836 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 CCDC174Q6PII3 467 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 KCTD1Q719H9 257 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 DGKHQ86XP1 1220 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 TMEM199Q8N511 208 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 CRBNQ96SW2 442 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.66□□□□□ -1.341e-11■■□□□ 13.1
CTNNA1-219ENST00000520158 LRRC37A2A6NM11 1700 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 GRIN2DO15399 1336 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 WDR19Q8NEZ3 1342 aa6.66□□□□□ -1.34
CTNNA1-219ENST00000520158 A0A0D9SFI3 127 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 DYNC1LI2O43237 492 aaPredicted RBP6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 ZEB2O60315 1214 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 PDHBP11177 359 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 SLC4A3P48751 1232 aa6.65□□□□□ -1.34
CTNNA1-219ENST00000520158 MFAP1P55081 439 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms