RNA–Protein interactions for RNA: ENST00000520102.1

CHMP7-208, Transcript of charged multivesicular body protein 7, humanhuman

TSL 4

Gene CHMP7, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-208ENST00000520102 PRDM6Q9NQX0 595 aa9.27□□□□□ -0.93
CHMP7-208ENST00000520102 ADD3Q9UEY8 706 aaKnown RBP9.27□□□□□ -0.93
CHMP7-208ENST00000520102 ZBTB47Q9UFB7 747 aaPredicted RBP9.27□□□□□ -0.93
CHMP7-208ENST00000520102 GBF1Q92538 1859 aa9.27□□□□□ -0.93
CHMP7-208ENST00000520102 CUL9Q8IWT3 2517 aa9.27□□□□□ -0.93
CHMP7-208ENST00000520102 MUC3AQ02505 3323 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 PTPDC1A2A3K4 754 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 FGBP02675 491 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 PDHBP11177 359 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 HAND2P61296 217 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 PURAQ00577 322 aaKnown RBP9.26□□□□□ -0.93
CHMP7-208ENST00000520102 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
CHMP7-208ENST00000520102 CLEC4DQ8WXI8 215 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 PPM1EQ8WY54 764 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 VWCEQ96DN2 955 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 SCLYQ96I15 445 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 CRBNQ96SW2 442 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 GAS2L1Q99501 681 aaPredicted RBP9.26□□□□□ -0.93
CHMP7-208ENST00000520102 SEZ6LQ9BYH1 1024 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 WDR11Q9BZH6 1224 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 ALDH8A1Q9H2A2 487 aaPredicted RBP9.26□□□□□ -0.93
CHMP7-208ENST00000520102 MTIF3Q9H2K0 278 aaKnown RBP9.26□□□□□ -0.93
CHMP7-208ENST00000520102 NKX2-4Q9H2Z4 354 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 TCP11L1Q9NUJ3 509 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 YBX2Q9Y2T7 364 aaKnown RBP9.26□□□□□ -0.93
CHMP7-208ENST00000520102 ZMYM6O95789 1325 aa9.26□□□□□ -0.93
CHMP7-208ENST00000520102 LOC102724159A0A0B4J2E5 919 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 RBM47A0AV96 593 aaKnown RBP9.25□□□□□ -0.93
CHMP7-208ENST00000520102 CYP2C9P11712 490 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 CALML3P27482 149 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 RABGGTBP53611 331 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 RPS6P62753 249 aaKnown RBP9.25□□□□□ -0.93
CHMP7-208ENST00000520102 ZNF543Q08ER8 600 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 HDAC1Q13547 482 aaPredicted RBP9.25□□□□□ -0.93
CHMP7-208ENST00000520102 ADGRE1Q14246 886 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 PWP2Q15269 919 aaKnown RBP9.25□□□□□ -0.93
CHMP7-208ENST00000520102 RAB30Q15771 203 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 TJAP1Q5JTD0 557 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 RNF207Q6ZRF8 634 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 TBC1D10CQ8IV04 446 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 SYMPKQ92797 1274 aaKnown RBP9.25□□□□□ -0.93
CHMP7-208ENST00000520102 TRMT13Q9NUP7 481 aaKnown RBP9.25□□□□□ -0.93
CHMP7-208ENST00000520102 MSRAQ9UJ68 235 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 CCDC171Q6TFL3 1326 aa9.25□□□□□ -0.93
CHMP7-208ENST00000520102 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 MYL3P08590 195 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 SNHG28P0DPA3 235 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 MYOGP15173 224 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 EDNRBP24530 442 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 CPT1AP50416 773 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 PDE4DQ08499 809 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 AKNAD1Q5T1N1 836 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 MFSD6Q6ZSS7 791 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
CHMP7-208ENST00000520102 OR6J1Q8NGC5 347 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 PPP1R13LQ8WUF5 828 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 COPS5Q92905 334 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 TTC14Q96N46 770 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 ZKSCAN3Q9BRR0 538 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 LNPKQ9C0E8 428 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 CPVLQ9H3G5 476 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 SLC28A3Q9HAS3 691 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 TNKSO95271 1327 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 NEDD4P46934 1319 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 WDR19Q8NEZ3 1342 aa9.24□□□□□ -0.93
CHMP7-208ENST00000520102 SCN5AQ14524 2016 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 ZBBXA8MT70 800 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 SUPT20HL2P0C7V6 817 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 GOLGA8HP0CJ92 632 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 IGFBP4P22692 258 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 TTLL4Q14679 1199 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 PPP2R5BQ15173 497 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 CCDC85BQ15834 202 aaPredicted RBP9.23□□□□□ -0.93
CHMP7-208ENST00000520102 NBPF20Q3BBV1 942 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 USH1GQ495M9 461 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 FAM47CQ5HY64 1035 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 DEFB128Q7Z7B8 93 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 TICAM2Q86XR7 235 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 DNERQ8NFT8 737 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 RILPL2Q969X0 211 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 MTG1Q9BT17 334 aaPredicted RBP9.23□□□□□ -0.93
CHMP7-208ENST00000520102 GPHNQ9NQX3 736 aaPredicted RBP9.23□□□□□ -0.93
CHMP7-208ENST00000520102 PNMA2Q9UL42 364 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 SLC4A7Q9Y6M7 1214 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 CHD9Q3L8U1 2897 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 SCN10AQ9Y5Y9 1956 aa9.23□□□□□ -0.93
CHMP7-208ENST00000520102 LAMA4Q16363 1823 aa9.22□□□□□ -0.93
CHMP7-208ENST00000520102 TANC1Q9C0D5 1861 aa9.22□□□□□ -0.93
CHMP7-208ENST00000520102 A6NJR5 290 aa9.22□□□□□ -0.93
CHMP7-208ENST00000520102 NKRFO15226 690 aaKnown RBP eCLIP9.22□□□□□ -0.93
CHMP7-208ENST00000520102 ARIH2O95376 493 aa9.22□□□□□ -0.93
CHMP7-208ENST00000520102 PFKMP08237 780 aa9.22□□□□□ -0.93
CHMP7-208ENST00000520102 TXNP10599 105 aaKnown RBP9.22□□□□□ -0.93
CHMP7-208ENST00000520102 PCP11498 1178 aaKnown RBP9.22□□□□□ -0.93
CHMP7-208ENST00000520102 ATP2A2P16615 1042 aaKnown RBP9.22□□□□□ -0.93
CHMP7-208ENST00000520102 SDSP20132 328 aa9.22□□□□□ -0.93
CHMP7-208ENST00000520102 GPATCH4Q5T3I0 446 aaKnown RBP9.22□□□□□ -0.93
CHMP7-208ENST00000520102 PPP2R2DQ66LE6 453 aa9.22□□□□□ -0.93
CHMP7-208ENST00000520102 SCFD2Q8WU76 684 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms