RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 BACH2Q9BYV9 841 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 RNF208Q9H0X6 261 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 MCM3APO60318 1980 aa13.7□□□□□ -0.22
HPS4-218ENST00000519774 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 PPFIA3O75145 1194 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 CFBP00751 764 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 RPS6P62753 249 aaKnown RBP13.69□□□□□ -0.22
HPS4-218ENST00000519774 FUT2Q10981 343 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 HEATR3Q7Z4Q2 680 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 MCF2L2Q86YR7 1114 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 TBC1D5Q92609 795 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 ZNF274Q96GC6 653 aaPredicted RBP13.69□□□□□ -0.22
HPS4-218ENST00000519774 KIF2CQ99661 725 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 TINF2Q9BSI4 451 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 ALDH8A1Q9H2A2 487 aaPredicted RBP13.69□□□□□ -0.22
HPS4-218ENST00000519774 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
HPS4-218ENST00000519774 DIS3Q9Y2L1 958 aaKnown RBP13.69□□□□□ -0.22
HPS4-218ENST00000519774 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
HPS4-218ENST00000519774 CPLX1O14810 134 aa13.68□□□□□ -0.22
HPS4-218ENST00000519774 CCND3P30281 292 aaPredicted RBP13.68□□□□□ -0.22
HPS4-218ENST00000519774 MAP3K21Q5TCX8 1036 aa13.68□□□□□ -0.22
HPS4-218ENST00000519774 PHKBQ93100 1093 aa13.68□□□□□ -0.22
HPS4-218ENST00000519774 TBC1D32Q96NH3 1257 aa13.68□□□□□ -0.22
HPS4-218ENST00000519774 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.68□□□□□ -0.22
HPS4-218ENST00000519774 SLKQ9H2G2 1235 aaPredicted RBP13.68□□□□□ -0.22
HPS4-218ENST00000519774 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
HPS4-218ENST00000519774 DDX49Q9Y6V7 483 aaKnown RBP13.68□□□□□ -0.22
HPS4-218ENST00000519774 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
HPS4-218ENST00000519774 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 RPTORQ8N122 1335 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 OPLAHO14841 1288 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 CYBAP13498 195 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 CNGA1P29973 690 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 HOXA13P31271 388 aaPredicted RBP13.67□□□□□ -0.22
HPS4-218ENST00000519774 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
HPS4-218ENST00000519774 RABEP1Q15276 862 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 PRAMEF19Q5SWL8 479 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
HPS4-218ENST00000519774 SLC26A6Q9BXS9 759 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 ADD3Q9UEY8 706 aaKnown RBP13.67□□□□□ -0.22
HPS4-218ENST00000519774 ZHX1Q9UKY1 873 aaPredicted RBP13.67□□□□□ -0.22
HPS4-218ENST00000519774 CNPY2Q9Y2B0 182 aa13.67□□□□□ -0.22
HPS4-218ENST00000519774 ASTN1O14525 1302 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 SYNGAP1Q96PV0 1343 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 ASB14A6NK59 587 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 PFKFB2O60825 505 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 LARGE1O95461 756 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 IGHA2P01877 340 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 IFNAR1P17181 557 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 ALDH5A1P51649 535 aaPredicted RBP13.66□□□□□ -0.22
HPS4-218ENST00000519774 NAPAP54920 295 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 SCRN1Q12765 414 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 NTRK3Q16288 839 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 CPLX2Q6PUV4 134 aaKnown RBP13.66□□□□□ -0.22
HPS4-218ENST00000519774 MAMDC4Q6UXC1 1216 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 RGS22Q8NE09 1264 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 TRPV1Q8NER1 839 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 SYTL5Q8TDW5 730 aaPredicted RBP13.66□□□□□ -0.22
HPS4-218ENST00000519774 DEFB118Q96PH6 123 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
HPS4-218ENST00000519774 COL20A1Q9P218 1284 aa13.66□□□□□ -0.22
HPS4-218ENST00000519774 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
HPS4-218ENST00000519774 FRMPD3Q5JV73 1810 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 SNAI1O95863 264 aaPredicted RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 POLR2MP0CAP2 368 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 HSD17B4P51659 736 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 ME3Q16798 604 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 NECAB1Q8N987 351 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 U2AF1L4Q8WU68 220 aaKnown RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 CUL5Q93034 780 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 TAAR1Q96RJ0 339 aa13.65□□□□□ -0.22
HPS4-218ENST00000519774 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 PAK6Q9NQU5 681 aaPredicted RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 RBM27Q9P2N5 1060 aaKnown RBP13.65□□□□□ -0.22
HPS4-218ENST00000519774 hCG_1984214I3L0E3 225 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 STXBP3O00186 592 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 DTNBO60941 627 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 GJB1P08034 283 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 SCG2P13521 617 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 EIF2AK2P19525 551 aaKnown RBP13.64□□□□□ -0.23
HPS4-218ENST00000519774 PDE4DQ08499 809 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 SSRP1Q08945 709 aaKnown RBP13.64□□□□□ -0.23
HPS4-218ENST00000519774 PFKFB3Q16875 520 aaPredicted RBP13.64□□□□□ -0.23
HPS4-218ENST00000519774 ARHGEF16Q5VV41 709 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 ANO1Q5XXA6 986 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 USP17L6PQ6QN14 398 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 EEPD1Q7L9B9 569 aa13.64□□□□□ -0.23
HPS4-218ENST00000519774 FBXO16Q8IX29 292 aaPredicted RBP13.64□□□□□ -0.23
HPS4-218ENST00000519774 ZNF713Q8N859 430 aaPredicted RBP13.64□□□□□ -0.23
HPS4-218ENST00000519774 SMARCC2Q8TAQ2 1214 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms