RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 RNF40O75150 1001 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 IQCF3P0C7M6 154 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 ACTN1P12814 892 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 RRP1P56182 461 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 EPC2Q52LR7 807 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 FAM117BQ6P1L5 589 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 LINS1Q8NG48 757 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 CYP2W1Q8TAV3 490 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 KLHDC4Q8TBB5 520 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 FGD4Q96M96 766 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 KATNBL1Q9H079 304 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 SLC5A4Q9NY91 659 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 CD207Q9UJ71 328 aa8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 ZHX1Q9UKY1 873 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-216ENST00000519489 H3BNC9 293 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 GH2P01242 217 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 FCER1AP12319 257 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 ZEB1P37275 1124 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 SLC4A3P48751 1232 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 ANGPT1Q15389 498 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 CCDC144BQ3MJ40 725 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 METTL24Q5JXM2 366 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 CWF19L1Q69YN2 538 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 ATG4CQ96DT6 458 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 RPGRIP1Q96KN7 1286 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 FTOQ9C0B1 505 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 KIAA1683Q9H0B3 1180 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 MROH8Q9H579 483 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 INCENPQ9NQS7 918 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 HERC5Q9UII4 1024 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 CNPY2Q9Y2B0 182 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 DSPP15924 2871 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 MROH7-TTC4A0A0A0MT08 1334 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 WDFY3Q8IZQ1 3526 aa8.5□□□□□ -1.05
CTNNA1-216ENST00000519489 A0A1B0GUL7 405 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 BRD1O95696 1058 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 ADAM15Q13444 863 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 GPM6BQ13491 265 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 ACVR2BQ13705 512 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 PLS1Q14651 629 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 TMEM132BQ14DG7 1078 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 SUMF1Q8NBK3 374 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 SMRP1Q8NCR6 262 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 MMP19Q99542 508 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 DIS3Q9Y2L1 958 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 USP15Q9Y4E8 981 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 ITPR1Q14643 2758 aa8.49□□□□□ -1.05
CTNNA1-216ENST00000519489 A0A1W2PRG0 241 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 BAIAP3O94812 1187 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 PHKA1P46020 1223 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 LMOD3Q0VAK6 560 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 COG2Q14746 738 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 PTPROQ16827 1216 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 CCDC30Q5VVM6 783 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 LRSAM1Q6UWE0 723 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 MAMDC4Q6UXC1 1216 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 CCDC146Q8IYE0 955 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 DNAAF4Q8WXU2 420 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 RUBCNQ92622 972 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 SUCLG2Q96I99 432 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 IGFLR1Q9H665 355 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 MYH16Q9H6N6 1097 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 CTNNA3Q9UI47 895 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 LAMA5O15230 3695 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 CLSPNQ9HAW4 1339 aa8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 USP9XQ93008 2570 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-216ENST00000519489 SIP14410 1827 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 GRM6O15303 877 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 NPR3P17342 541 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 TGM1P22735 817 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 RFC2P35250 354 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 KCNJ6P48051 423 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 MECOMQ03112 1051 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 CAMK1Q14012 370 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 BEND3Q5T5X7 828 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.051e-6■■□□□ 12.3
CTNNA1-216ENST00000519489 CCDC105Q8IYK2 499 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 KREMEN2Q8NCW0 462 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 SH3RF3Q8TEJ3 882 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 CTAGE1Q96RT6 745 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 FEZ1Q99689 392 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 PRR14Q9BWN1 585 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 PHF7Q9BWX1 381 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 PI4KBQ9UBF8 816 aa8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 DDX49Q9Y6V7 483 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-216ENST00000519489 DNAJC25-GNG10A0A024R161 153 aa8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 F6X3S4 739 aa8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 LGR5O75473 907 aa8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 GLP2RO95838 553 aa8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 PROS1P07225 676 aa8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 IFIT1P09914 478 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 LINC00271P0C7V0 271 aa8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 HTRA4P83105 476 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 PUM3Q15397 648 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 PPM1JQ5JR12 505 aa8.46□□□□□ -1.06
CTNNA1-216ENST00000519489 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms