RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 TTBK2Q6IQ55 1244 aa22.72■■□□□ 1.23
CHMP7-204ENST00000519414 OTOP2Q7RTS6 562 aa22.72■■□□□ 1.23
CHMP7-204ENST00000519414 RPUSD2Q8IZ73 545 aaKnown RBP22.72■■□□□ 1.23
CHMP7-204ENST00000519414 ZBTB47Q9UFB7 747 aaPredicted RBP22.72■■□□□ 1.23
CHMP7-204ENST00000519414 SPTBN5Q9NRC6 3674 aaKnown RBP22.71■■□□□ 1.23
CHMP7-204ENST00000519414 TOP1P11387 765 aaKnown RBP22.71■■□□□ 1.23
CHMP7-204ENST00000519414 ALDH5A1P51649 535 aaPredicted RBP22.71■■□□□ 1.23
CHMP7-204ENST00000519414 PPM1EQ8WY54 764 aa22.71■■□□□ 1.23
CHMP7-204ENST00000519414 WNT8AQ9H1J5 351 aa22.71■■□□□ 1.23
CHMP7-204ENST00000519414 ALDH8A1Q9H2A2 487 aaPredicted RBP22.71■■□□□ 1.23
CHMP7-204ENST00000519414 NKX2-4Q9H2Z4 354 aa22.71■■□□□ 1.23
CHMP7-204ENST00000519414 SLC28A3Q9HAS3 691 aa22.71■■□□□ 1.23
CHMP7-204ENST00000519414 TOMM22Q9NS69 142 aa22.71■■□□□ 1.23
CHMP7-204ENST00000519414 TCP11L1Q9NUJ3 509 aa22.71■■□□□ 1.23
CHMP7-204ENST00000519414 POLR3EQ9NVU0 708 aa22.71■■□□□ 1.23
CHMP7-204ENST00000519414 ATXN2LQ8WWM7 1075 aaKnown RBP22.7■■□□□ 1.22
CHMP7-204ENST00000519414 TMEM47Q9BQJ4 181 aa22.7■■□□□ 1.22
CHMP7-204ENST00000519414 WDR11Q9BZH6 1224 aa22.7■■□□□ 1.22
CHMP7-204ENST00000519414 PNMA2Q9UL42 364 aa22.7■■□□□ 1.22
CHMP7-204ENST00000519414 LRRC37A2A6NM11 1700 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 RBM47A0AV96 593 aaKnown RBP22.69■■□□□ 1.22
CHMP7-204ENST00000519414 PTPDC1A2A3K4 754 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 NFIBO00712 420 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 FGAP02671 866 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 SUPT20HL2P0C7V6 817 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 CPT1AP50416 773 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 ADGRE1Q14246 886 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 ANKRD45Q5TZF3 282 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 RWDD1Q9H446 243 aaPredicted RBP22.69■■□□□ 1.22
CHMP7-204ENST00000519414 YBX2Q9Y2T7 364 aaKnown RBP22.69■■□□□ 1.22
CHMP7-204ENST00000519414 SLC4A7Q9Y6M7 1214 aa22.69■■□□□ 1.22
CHMP7-204ENST00000519414 FRMPD2Q68DX3 1309 aaPredicted RBP22.68■■□□□ 1.22
CHMP7-204ENST00000519414 PURAQ00577 322 aaKnown RBP22.68■■□□□ 1.22
CHMP7-204ENST00000519414 RRP12Q5JTH9 1297 aaKnown RBP22.68■■□□□ 1.22
CHMP7-204ENST00000519414 TICAM2Q86XR7 235 aa22.68■■□□□ 1.22
CHMP7-204ENST00000519414 GPCPD1Q9NPB8 672 aa22.68■■□□□ 1.22
CHMP7-204ENST00000519414 TNFRSF10AO00220 468 aa22.67■■□□□ 1.22
CHMP7-204ENST00000519414 IGFBP4P22692 258 aa22.67■■□□□ 1.22
CHMP7-204ENST00000519414 MCMDC2Q4G0Z9 681 aa22.67■■□□□ 1.22
CHMP7-204ENST00000519414 CLEC4DQ8WXI8 215 aa22.67■■□□□ 1.22
CHMP7-204ENST00000519414 SCLYQ96I15 445 aa22.67■■□□□ 1.22
CHMP7-204ENST00000519414 GPHNQ9NQX3 736 aaPredicted RBP22.67■■□□□ 1.22
CHMP7-204ENST00000519414 TRMT13Q9NUP7 481 aaKnown RBP22.67■■□□□ 1.22
CHMP7-204ENST00000519414 THEGQ9P2T0 379 aa22.67■■□□□ 1.22
CHMP7-204ENST00000519414 TTC28Q96AY4 2481 aa22.67■■□□□ 1.22
CHMP7-204ENST00000519414 TNKSO95271 1327 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 ZMYM6O95789 1325 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 PFKMP08237 780 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 MYL3P08590 195 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 PDHBP11177 359 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 CALML3P27482 149 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 PDE1AP54750 535 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 BRDTQ58F21 947 aaPredicted RBP22.66■■□□□ 1.22
CHMP7-204ENST00000519414 SLC30A10Q6XR72 485 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 RNF207Q6ZRF8 634 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 VWCEQ96DN2 955 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 FAM227BQ96M60 508 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 TTC14Q96N46 770 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 ASB2Q96Q27 587 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 MPHOSPH6Q99547 160 aaKnown RBP22.66■■□□□ 1.22
CHMP7-204ENST00000519414 MTG1Q9BT17 334 aaPredicted RBP22.66■■□□□ 1.22
CHMP7-204ENST00000519414 PCDHA11Q9Y5I1 949 aa22.66■■□□□ 1.22
CHMP7-204ENST00000519414 NKRFO15226 690 aaKnown RBP eCLIP22.65■■□□□ 1.22
CHMP7-204ENST00000519414 HSPD1P10809 573 aaKnown RBP22.65■■□□□ 1.22
CHMP7-204ENST00000519414 CYP2C9P11712 490 aa22.65■■□□□ 1.22
CHMP7-204ENST00000519414 RABGGTBP53611 331 aa22.65■■□□□ 1.22
CHMP7-204ENST00000519414 PDE4DQ08499 809 aa22.65■■□□□ 1.22
CHMP7-204ENST00000519414 OR6J1Q8NGC5 347 aa22.65■■□□□ 1.22
CHMP7-204ENST00000519414 WDR19Q8NEZ3 1342 aa22.64■■□□□ 1.22
CHMP7-204ENST00000519414 RAD50Q92878 1312 aa22.64■■□□□ 1.22
CHMP7-204ENST00000519414 A0A0D9SFI3 127 aa22.64■■□□□ 1.21
CHMP7-204ENST00000519414 ZBBXA8MT70 800 aa22.64■■□□□ 1.21
CHMP7-204ENST00000519414 PCP11498 1178 aaKnown RBP22.64■■□□□ 1.21
CHMP7-204ENST00000519414 ATP2A2P16615 1042 aaKnown RBP22.64■■□□□ 1.21
CHMP7-204ENST00000519414 RPS6P62753 249 aaKnown RBP22.64■■□□□ 1.21
CHMP7-204ENST00000519414 ZNF543Q08ER8 600 aa22.64■■□□□ 1.21
CHMP7-204ENST00000519414 CCDC85BQ15834 202 aaPredicted RBP22.64■■□□□ 1.21
CHMP7-204ENST00000519414 PPP2R2DQ66LE6 453 aa22.64■■□□□ 1.21
CHMP7-204ENST00000519414 DNERQ8NFT8 737 aa22.64■■□□□ 1.21
CHMP7-204ENST00000519414 CHD9Q3L8U1 2897 aa22.64■■□□□ 1.21
CHMP7-204ENST00000519414 KPNA6O60684 536 aa22.63■■□□□ 1.21
CHMP7-204ENST00000519414 SNHG28P0DPA3 235 aa22.63■■□□□ 1.21
CHMP7-204ENST00000519414 EDNRBP24530 442 aa22.63■■□□□ 1.21
CHMP7-204ENST00000519414 MRPS5P82675 430 aaKnown RBP22.63■■□□□ 1.21
CHMP7-204ENST00000519414 PPP2R5BQ15173 497 aa22.63■■□□□ 1.21
CHMP7-204ENST00000519414 MFSD6Q6ZSS7 791 aa22.63■■□□□ 1.21
CHMP7-204ENST00000519414 SCFD2Q8WU76 684 aa22.63■■□□□ 1.21
CHMP7-204ENST00000519414 A6NJR5 290 aa22.62■■□□□ 1.21
CHMP7-204ENST00000519414 B4DLN1 442 aa22.62■■□□□ 1.21
CHMP7-204ENST00000519414 MRPL12P52815 198 aaKnown RBP22.62■■□□□ 1.21
CHMP7-204ENST00000519414 TTLL4Q14679 1199 aa22.62■■□□□ 1.21
CHMP7-204ENST00000519414 NBPF20Q3BBV1 942 aa22.62■■□□□ 1.21
CHMP7-204ENST00000519414 NFRKBQ6P4R8 1299 aa22.62■■□□□ 1.21
CHMP7-204ENST00000519414 LCTP09848 1927 aa22.62■■□□□ 1.21
CHMP7-204ENST00000519414 IGHDP01880 384 aa22.61■■□□□ 1.21
CHMP7-204ENST00000519414 MYOGP15173 224 aa22.61■■□□□ 1.21
CHMP7-204ENST00000519414 RFC2P35250 354 aa22.61■■□□□ 1.21
CHMP7-204ENST00000519414 HAND2P61296 217 aa22.61■■□□□ 1.21
CHMP7-204ENST00000519414 PTPN11Q06124 597 aaPredicted RBP22.61■■□□□ 1.21
CHMP7-204ENST00000519414 NMIQ13287 307 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms