RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 PPP1R9AQ9ULJ8 1098 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 MRPL11Q9Y3B7 192 aaKnown RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 AFG3L2Q9Y4W6 797 aa14.07□□□□□ -0.16
SPIDR-209ENST00000519141 CTDP1Q9Y5B0 961 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-209ENST00000519141 TRPM7Q96QT4 1865 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 SPDYE3A6NKU9 549 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 MEIS2O14770 477 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 FOSP01100 380 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-209ENST00000519141 FDX1P10109 184 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 SPECC1Q5M775 1068 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 CKAP2LQ8IYA6 745 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 ANKRD13AQ8IZ07 590 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 C4orf32Q8N8J7 132 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 TIGD1Q96MW7 591 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 NAP1L4Q99733 375 aaKnown RBP14.06□□□□□ -0.16
SPIDR-209ENST00000519141 SDF4Q9BRK5 362 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 CCPG1Q9ULG6 757 aa14.06□□□□□ -0.16
SPIDR-209ENST00000519141 LOC285556D6RIA3 1793 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 PIK3CDO00329 1044 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 OPLAHO14841 1288 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 OR52Z1P0C646 297 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 PRPHP41219 470 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 MRE11P49959 708 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 ARMC9Q7Z3E5 817 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 TMEM60Q9H2L4 133 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 ELP3Q9H9T3 547 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 GRPEL1Q9HAV7 217 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 SLC38A10Q9HBR0 1119 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 PNMA2Q9UL42 364 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 RLFQ13129 1914 aa14.05□□□□□ -0.16
SPIDR-209ENST00000519141 COL11A1P12107 1806 aaPredicted RBP14.05□□□□□ -0.16
SPIDR-209ENST00000519141 ZBED4O75132 1171 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 CCDC192P0DO97 292 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 GCFC2P16383 781 aaKnown RBP14.04□□□□□ -0.16
SPIDR-209ENST00000519141 LONP1P36776 959 aaKnown RBP14.04□□□□□ -0.16
SPIDR-209ENST00000519141 SH3D19Q5HYK7 790 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 DTHD1Q6ZMT9 781 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 ZNF536O15090 1300 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 RASSF10A6NK89 507 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 GCOM1H8Y6P7 765 aaPredicted RBP14.04□□□□□ -0.16
SPIDR-209ENST00000519141 TDP2O95551 362 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 CFBP00751 764 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 POLR2MP0CAP2 368 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 HOXA13P31271 388 aaPredicted RBP14.04□□□□□ -0.16
SPIDR-209ENST00000519141 PPATQ06203 517 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 PPP4R3AQ6IN85 833 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 ERO1BQ86YB8 467 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 SYMPKQ92797 1274 aaKnown RBP14.04□□□□□ -0.16
SPIDR-209ENST00000519141 AGBL1Q96MI9 1066 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 FUCA2Q9BTY2 467 aa14.04□□□□□ -0.16
SPIDR-209ENST00000519141 SPDYE5A6NIY4 337 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 TXLNAP40222 546 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 VEGFBP49765 207 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 USP11P51784 963 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 TYRO3Q06418 890 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 IL17AQ16552 155 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 CALCRLQ16602 461 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 DEFB115Q30KQ5 88 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 SASS6Q6UVJ0 657 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 USP49Q70CQ1 688 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 MOB2Q70IA6 237 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 CPXCR1Q8N123 301 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 ATG4CQ96DT6 458 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 OTUD5Q96G74 571 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 EPSTI1Q96J88 318 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 CLMNQ96JQ2 1002 aa14.03□□□□□ -0.16
SPIDR-209ENST00000519141 RAVER2Q9HCJ3 691 aaKnown RBP14.03□□□□□ -0.16
SPIDR-209ENST00000519141 VWA5AO00534 786 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 POLR2DO15514 142 aaKnown RBP14.02□□□□□ -0.16
SPIDR-209ENST00000519141 SLC37A4O43826 429 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 CELF2O95319 508 aaKnown RBP14.02□□□□□ -0.16
SPIDR-209ENST00000519141 DSG3P32926 999 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 SREBF1P36956 1147 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 ARHGAP4P98171 946 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 COG2Q14746 738 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 MOXD1Q6UVY6 613 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 KRBA2Q6ZNG9 492 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 FCHSD1Q86WN1 690 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 PDILTQ8N807 584 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 CNNM3Q8NE01 707 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 CCDC34Q96HJ3 373 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 PYM1Q9BRP8 204 aaKnown RBP14.02□□□□□ -0.16
SPIDR-209ENST00000519141 RBSNQ9H1K0 784 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 EHMT1Q9H9B1 1298 aa14.02□□□□□ -0.16
SPIDR-209ENST00000519141 DDX25Q9UHL0 483 aaKnown RBP14.02□□□□□ -0.16
SPIDR-209ENST00000519141 HOOK1Q9UJC3 728 aaKnown RBP14.02□□□□□ -0.16
SPIDR-209ENST00000519141 ABT1Q9ULW3 272 aaKnown RBP14.02□□□□□ -0.16
SPIDR-209ENST00000519141 MYPNQ86TC9 1320 aa14.02□□□□□ -0.17
SPIDR-209ENST00000519141 EDIL3O43854 480 aa14.01□□□□□ -0.17
SPIDR-209ENST00000519141 ALAS1P13196 640 aa14.01□□□□□ -0.17
SPIDR-209ENST00000519141 TMEM266Q2M3C6 531 aa14.01□□□□□ -0.17
SPIDR-209ENST00000519141 MCF2L2Q86YR7 1114 aa14.01□□□□□ -0.17
SPIDR-209ENST00000519141 AK8Q96MA6 479 aa14.01□□□□□ -0.17
SPIDR-209ENST00000519141 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
SPIDR-209ENST00000519141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.01□□□□□ -0.17
SPIDR-209ENST00000519141 CXCL11O14625 94 aa14.01□□□□□ -0.17
SPIDR-209ENST00000519141 IRF6O14896 467 aa14.01□□□□□ -0.17
SPIDR-209ENST00000519141 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms