RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 C1QTNF1Q9BXJ1 281 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 NKX2-4Q9H2Z4 354 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 VCPKMTQ9H867 229 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 MCM9Q9NXL9 1143 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 CXXC1Q9P0U4 656 aaPredicted RBP8.71□□□□□ -1.02
PVT1-206ENST00000517838 MSRAQ9UJ68 235 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 FAM184BQ9ULE4 1060 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 CNPY2Q9Y2B0 182 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 YBX2Q9Y2T7 364 aaKnown RBP8.71□□□□□ -1.02
PVT1-206ENST00000517838 ELP1O95163 1332 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 SYNRGQ9UMZ2 1314 aa8.71□□□□□ -1.02
PVT1-206ENST00000517838 FRMPD3Q5JV73 1810 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 SMIM22K7EJ46 135 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 VWA5AO00534 786 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 EPB41L2O43491 1005 aaKnown RBP8.7□□□□□ -1.02
PVT1-206ENST00000517838 AKR1B1P15121 316 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 CYP2C18P33260 490 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 STAT3P40763 770 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 NUCB2P80303 420 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 CCDC174Q6PII3 467 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 FAM126BQ8IXS8 530 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 TMEM199Q8N511 208 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 REPS2Q8NFH8 660 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 HERVK_113Q902F9 699 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 DYNLL2Q96FJ2 89 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 GLT1D1Q96MS3 346 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 DCP1AQ9NPI6 582 aaPredicted RBP8.7□□□□□ -1.02
PVT1-206ENST00000517838 ZNF214Q9UL59 606 aaPredicted RBP8.7□□□□□ -1.02
PVT1-206ENST00000517838 CHD7Q9P2D1 2997 aa8.7□□□□□ -1.02
PVT1-206ENST00000517838 ZNF236Q9UL36 1845 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 ARVCFO00192 962 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 WDR46O15213 610 aaKnown RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 ADCY6O43306 1168 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 DUSP11O75319 330 aaKnown RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 CD4P01730 458 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 ASGR1P07306 291 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 CST5P28325 142 aaPredicted RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 ICA1Q05084 483 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 NMIQ13287 307 aaPredicted RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 RAB30Q15771 203 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 PSRC1Q6PGN9 363 aaPredicted RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 TMED8Q6PL24 325 aaPredicted RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 MAMDC4Q6UXC1 1216 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 MSL3Q8N5Y2 521 aaKnown RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 IL27Q8NEV9 243 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 SDR42E1Q8WUS8 393 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 LRFN3Q9BTN0 628 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 UPF3BQ9BZI7 483 aaKnown RBP8.69□□□□□ -1.02
PVT1-206ENST00000517838 PPP1R12CQ9BZL4 782 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 EPHX3Q9H6B9 360 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 SLC28A3Q9HAS3 691 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 IL23AQ9NPF7 189 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 SYNGAP1Q96PV0 1343 aa8.69□□□□□ -1.02
PVT1-206ENST00000517838 DNAJC25-GNG10A0A024R161 153 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 CTAGE5O15320 804 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 FGBP02675 491 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 EEF2P13639 858 aaKnown RBP8.68□□□□□ -1.02
PVT1-206ENST00000517838 HSPA4P34932 840 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 KCNQ1P51787 676 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 RABGGTBP53611 331 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 ACVR2BQ13705 512 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 SLC9C2Q5TAH2 1124 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 RNF20Q5VTR2 975 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 OTOP2Q7RTS6 562 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 PCSK9Q8NBP7 692 aaKnown RBP8.68□□□□□ -1.02
PVT1-206ENST00000517838 TNPO1Q92973 898 aaKnown RBP8.68□□□□□ -1.02
PVT1-206ENST00000517838 VTI1AQ96AJ9 217 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 VWCEQ96DN2 955 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 CRNKL1Q9BZJ0 848 aaKnown RBP8.68□□□□□ -1.02
PVT1-206ENST00000517838 LSG1Q9H089 658 aaKnown RBP8.68□□□□□ -1.02
PVT1-206ENST00000517838 UPF3AQ9H1J1 476 aaKnown RBP8.68□□□□□ -1.02
PVT1-206ENST00000517838 SH2D4AQ9H788 454 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 SWAP70Q9UH65 585 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 ZHX1Q9UKY1 873 aaPredicted RBP8.68□□□□□ -1.02
PVT1-206ENST00000517838 PPP1R9AQ9ULJ8 1098 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 RIPK3Q9Y572 518 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 MROH7Q68CQ1 1323 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 CCDC171Q6TFL3 1326 aa8.68□□□□□ -1.02
PVT1-206ENST00000517838 A0A0U1RQG5 324 aaPredicted RBP8.67□□□□□ -1.02
PVT1-206ENST00000517838 TCRBV5S4A2TA0A5A2 114 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 PRKAB2O43741 272 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 C6orf222P0C671 652 aaPredicted RBP8.67□□□□□ -1.02
PVT1-206ENST00000517838 MYOGP15173 224 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 PDE6AP16499 860 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 ATP5JP18859 108 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 GJA9P57773 515 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 UMODL1Q5DID0 1318 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 GNASQ5JWF2 1037 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 FAM83BQ5T0W9 1011 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 MICALL1Q8N3F8 863 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 LCORLQ8N3X6 602 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 SLC43A3Q8NBI5 491 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 DDX11Q96FC9 970 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 FAM227BQ96M60 508 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 FGD4Q96M96 766 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 JAKMIP1Q96N16 626 aaKnown RBP8.67□□□□□ -1.02
PVT1-206ENST00000517838 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
PVT1-206ENST00000517838 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms