RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 DNASE2BQ8WZ79 361 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 NBPF4Q96M43 638 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 GORASP1Q9BQQ3 440 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 C11orf84Q9BUA3 381 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 MLST8Q9BVC4 326 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 GPR62Q9BZJ7 368 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 BHLHE41Q9C0J9 482 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 BCAS3Q9H6U6 928 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 L2HGDHQ9H9P8 463 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 CYP4F11Q9HBI6 524 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 NOD1Q9Y239 953 aa0.1□□□□□ -2.39
SNORA40.16-201ENST00000517238 IGKV3D-20A0A0C4DH25 116 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 EME2A4GXA9 379 aaPredicted RBP0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 A6NJR5 290 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 METTL12A8MUP2 240 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 F8W031 263 aaPredicted RBP0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 MATN4O95460 622 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 IGLV2-14P01704 120 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 DBHP09172 617 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 CACNB2Q08289 660 aaPredicted RBP0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 ETFDHQ16134 617 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 KIF26BQ2KJY2 2108 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 PPM1JQ5JR12 505 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 PRR31Q5SQ13 230 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 SYNE4Q8N205 404 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 TTLL6Q8N841 843 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 DTX3Q8N9I9 347 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 TSEN2Q8NCE0 465 aaKnown RBP0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 TPCN2Q8NHX9 752 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 PIK3R5Q8WYR1 880 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 TBC1D30Q9Y2I9 924 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 GIT1Q9Y2X7 761 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 ZNF281Q9Y2X9 895 aa0.09□□□□□ -2.4
SNORA40.16-201ENST00000517238 BRINP1O60477 761 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 ABHD16AO95870 558 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 PLGP00747 810 aaPredicted RBP0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 NTF4P34130 210 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 OCA2Q04671 838 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 LEXMQ3ZCV2 418 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 STK32CQ86UX6 486 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 SERINC5Q86VE9 423 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 KCT2Q8NC54 265 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 PROCA1Q8NCQ7 364 aaPredicted RBP0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 SUPT20HQ8NEM7 779 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 GAS2L2Q8NHY3 880 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 CPA5Q8WXQ8 436 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 YTHDC1Q96MU7 727 aaKnown RBP0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 OR14A2Q96R54 314 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 BARX1Q9HBU1 254 aaPredicted RBP0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 ANLNQ9NQW6 1124 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 TMEM63CQ9P1W3 806 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 CNTN3Q9P232 1028 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 ZNF777Q9ULD5 760 aaPredicted RBP0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 GPR55Q9Y2T6 319 aaPredicted RBP0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 CSADQ9Y600 493 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 SLC30A1Q9Y6M5 507 aa0.08□□□□□ -2.4
SNORA40.16-201ENST00000517238 A0A1W2PQ27 194 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 A0A1W2PQ64 194 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 A0A1W2PQC6 194 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 A0A1W2PQD8 194 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 A0A1W2PQJ5 194 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 SRGAP3O43295 1099 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 B3GALT4O96024 378 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 ZNF28P17035 718 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 CXCR5P32302 372 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 COMPP49747 757 aaPredicted RBP0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 USP14P54578 494 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 TRA2BP62995 288 aaKnown RBP0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 TUBA4AP68366 448 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 KLF9Q13886 244 aaPredicted RBP0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 ZIK1Q3SY52 487 aaPredicted RBP0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 KIAA1614Q5VZ46 1190 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 KCNV1Q6PIU1 500 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 RALYLQ86SE5 291 aaKnown RBP0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 CDH24Q86UP0 819 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 KLHL36Q8N4N3 616 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 TAB3Q8N5C8 712 aaPredicted RBP0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 MFSD2AQ8NA29 543 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 ZBTB38Q8NAP3 1195 aaPredicted RBP0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 DDB2Q92466 427 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 SYT3Q9BQG1 590 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 ELP3Q9H9T3 547 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 KRT82Q9NSB4 513 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 IMPACTQ9P2X3 320 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 ACSL6Q9UKU0 697 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 ZNF804BA4D1E1 1349 aa0.07□□□□□ -2.4
SNORA40.16-201ENST00000517238 A0A096LPE4 126 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 A0A1W2PPZ6 126 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 MYMKA6NI61 221 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 IFITM10A6NMD0 228 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 TRIM66O15016 1216 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 CELA2AP08217 269 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 TGFB3P10600 412 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 COL6A1P12109 1028 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 TYRP1P17643 537 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 EIF4G2P78344 907 aaKnown RBP eCLIP0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 HHEXQ03014 270 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 NFATC3Q12968 1075 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 ERV3-1Q14264 604 aa0.06□□□□□ -2.4
SNORA40.16-201ENST00000517238 RRP1BQ14684 758 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms