RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 POU4F1Q01851 419 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 DNM1Q05193 864 aaKnown RBP0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 RAPGEF1Q13905 1077 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 CLEC16AQ2KHT3 1053 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 PRAMEF18Q5VWM3 479 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 BICRALQ6AI39 1079 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 HID1Q8IV36 788 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 RBMXL3Q8N7X1 1067 aaKnown RBP0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 ELMO3Q96BJ8 720 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 FAM89AQ96GI7 184 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 NRDE2Q9H7Z3 1164 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 SEC61A2Q9H9S3 476 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 TXLNGQ9NUQ3 528 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 ERVK13-1Q9NX77 482 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 STIM2Q9P246 746 aa0.91□□□□□ -2.26
RNU6-539P-201ENST00000516665 PDGFAP04085 211 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 ARNTP27540 789 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 INPP5AQ14642 412 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 MIDNQ504T8 468 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 RPS26P11Q5JNZ5 115 aaPredicted RBP0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 HECTD2Q5U5R9 776 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 GSG1LQ6UXU4 331 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 BOLLQ8N9W6 283 aaKnown RBP0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 FAM98AQ8NCA5 519 aaKnown RBP0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 GDPD2Q9HCC8 539 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 ABCB6Q9NP58 842 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 PARPBPQ9NWS1 579 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 ZDHHC9Q9Y397 364 aa0.9□□□□□ -2.27
RNU6-539P-201ENST00000516665 RAD17O75943 681 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 PEX11BO96011 259 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 TACR1P25103 407 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 HIBADHP31937 336 aaKnown RBP0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 ITGA1P56199 1179 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 ETF1P62495 437 aaKnown RBP0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 PTPN12Q05209 780 aaKnown RBP0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 NAA30Q147X3 362 aaPredicted RBP0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 GPRIN1Q7Z2K8 1008 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 POLNQ7Z5Q5 900 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 TMPRSS6Q8IU80 811 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 TTLL6Q8N841 843 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 ABTB2Q8N961 1025 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 TSPAN17Q96FV3 270 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 LRFN3Q9BTN0 628 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 MLST8Q9BVC4 326 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 HDAC8Q9BY41 377 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 WNT10AQ9GZT5 417 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 L2HGDHQ9H9P8 463 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 GPN3Q9UHW5 284 aaPredicted RBP0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 PCDHA4Q9UN74 947 aa0.89□□□□□ -2.27
RNU6-539P-201ENST00000516665 SSU72P8A0A1W2PR75 194 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 CGB1A6NKQ9 187 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 H0Y858 1186 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 ATP9BO43861 1147 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 SYPP08247 313 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 LCE3EQ5T5B0 92 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 TECPR1Q7Z6L1 1165 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 FAM26EQ8N5C1 309 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 BEND2Q8NDZ0 799 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 GRIN3AQ8TCU5 1115 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 TCTN2Q96GX1 697 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 UCN2Q96RP3 112 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 TOR3AQ9H497 397 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 CBX8Q9HC52 389 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 ZFYVE28Q9HCC9 887 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 TLR9Q9NR96 1032 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 TMEM39AQ9NV64 488 aa0.88□□□□□ -2.27
RNU6-539P-201ENST00000516665 A0A1W2PQ27 194 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 A0A1W2PQ64 194 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 A0A1W2PQC6 194 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 A0A1W2PQD8 194 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 IL13P35225 146 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 PCBP3P57721 371 aaKnown RBP0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 NFATC3Q12968 1075 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 FOXP4Q8IVH2 680 aaPredicted RBP0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 GALNT12Q8IXK2 581 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 KLHL36Q8N4N3 616 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 PDPRQ8NCN5 879 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 TTC16Q8NEE8 873 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 NELL1Q92832 810 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 FCRL4Q96PJ5 515 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 PRM3Q9NNZ6 103 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 AURKAIP1Q9NWT8 199 aaPredicted RBP0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 RBPJLQ9UBG7 517 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 SLC30A1Q9Y6M5 507 aa0.87□□□□□ -2.27
RNU6-539P-201ENST00000516665 A0A1W2PNU3 283 aaPredicted RBP0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 A0A1W2PQJ5 194 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 PRSS47A8MTI9 375 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 PCSK2P16519 638 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 CCKARP32238 428 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 MLLT6P55198 1093 aaPredicted RBP0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 PPP2R3AQ06190 1150 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 VPS72Q15906 364 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 ANKMY2Q8IV38 441 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 LINC00116Q8NCU8 138 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 TMEM52Q8NDY8 209 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 SYTL5Q8TDW5 730 aaPredicted RBP0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 PLPPR2Q96GM1 343 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 PRIMPOLQ96LW4 560 aa0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 ZNF48Q96MX3 618 aaPredicted RBP0.86□□□□□ -2.27
RNU6-539P-201ENST00000516665 MKNK1Q9BUB5 465 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms