RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 ORAI3Q9BRQ5 295 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 LUC7LQ9NQ29 371 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 SPTLC3Q9NUV7 552 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 LUC7L2Q9Y383 392 aaKnown RBP4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 ST14Q9Y5Y6 855 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 BACE2Q9Y5Z0 518 aa4.28□□□□□ -1.72
SCARNA15.2-201ENST00000516409 C2orf71A6NGG8 1288 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 LEFTY1O75610 366 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CBX7O95931 251 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CKMP06732 381 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ELNP15502 786 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GLB1P16278 677 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ATP2A2P16615 1042 aaKnown RBP4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 LSSP48449 732 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SNRPNP63162 240 aaKnown RBP4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 TRIM28Q13263 835 aaKnown RBP4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GRIK4Q16099 956 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 TMEM177Q53S58 311 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ACBD5Q5T8D3 534 aaPredicted RBP4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CWF19L1Q69YN2 538 aaKnown RBP4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 NXNQ6DKJ4 435 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 KIF18BQ86Y91 864 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CCDC103Q8IW40 242 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 TPH2Q8IWU9 490 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 NEDD1Q8NHV4 660 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SLC16A10Q8TF71 515 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 IRF7Q92985 503 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ZFYVE21Q9BQ24 234 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CABP5Q9NP86 173 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 EMC7Q9NPA0 242 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GPR27Q9NS67 375 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 H2AFY2Q9P0M6 372 aaPredicted RBP4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CLEC1BQ9P126 229 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 RNF112Q9ULX5 631 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ZKSCAN5Q9Y2L8 839 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SPEF1Q9Y4P9 236 aa4.27□□□□□ -1.73
SCARNA15.2-201ENST00000516409 VSTM5A8MXK1 200 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 RFPL1O75677 317 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 EIF3JO75822 258 aaKnown RBP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GSNP06396 782 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CT47B1P0C2W7 299 aaPredicted RBP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PLS3P13797 630 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 NAT1P18440 290 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CYP7A1P22680 504 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 RXRBP28702 533 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PDE6BP35913 854 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 LTBRP36941 435 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 DNM2P50570 870 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ERVK-21P61565 698 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PCBP2Q15366 365 aaKnown RBP eCLIP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GFOD2Q3B7J2 385 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SEZ6L2Q6UXD5 910 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 RSPO2Q6UXX9 243 aaPredicted RBP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 LINC00114Q6XXX2 140 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 LBX2Q6XYB7 198 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 TMEM130Q8N3G9 435 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CISD2Q8N5K1 135 aaKnown RBP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CHST14Q8NCH0 376 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PCDH19Q8TAB3 1148 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 DIO2Q92813 273 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SLC39A13Q96H72 371 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 FUBP3Q96I24 572 aaKnown RBP eCLIP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 FCRL3Q96P31 734 aaPredicted RBP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CAMKK2Q96RR4 588 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ALG1Q9BT22 464 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 YIPF2Q9BWQ6 316 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 HDAC8Q9BY41 377 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 ASCC2Q9H1I8 757 aaPredicted RBP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 AKTIPQ9H8T0 292 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PPARGC1AQ9UBK2 798 aaKnown RBP4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 B4GALT6Q9UBX8 382 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 KCNH3Q9ULD8 1083 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 NPFFR2Q9Y5X5 522 aa4.26□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PTPDC1A2A3K4 754 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CCDC66A2RUB6 948 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GOLGA6CA6NDK9 693 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GOLGA6BA6NDN3 693 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PRR33A8MZF0 331 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 FZD9O00144 591 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SNUPNO95149 360 aaKnown RBP4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 LDHAP00338 332 aaKnown RBP4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GOLGA6DP0CG33 693 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CCND1P24385 295 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 GRIK1P39086 918 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SEPHS1P49903 392 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 MECP2P51608 486 aaKnown RBP4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 KPNA1P52294 538 aaPredicted RBP4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PAK1Q13153 545 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 OS9Q13438 667 aaPredicted RBP4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 HDAC1Q13547 482 aaPredicted RBP4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 BRD3Q15059 726 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CLEC16AQ2KHT3 1053 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 SFRP5Q5T4F7 317 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 OVCH1Q7RTY7 1134 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 C11orf74Q86VG3 221 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 KSR1Q8IVT5 923 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 CLRN3Q8NCR9 226 aa4.25□□□□□ -1.73
SCARNA15.2-201ENST00000516409 RCBTB1Q8NDN9 531 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms