RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 KIAA0355O15063 1070 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 DHX16O60231 1041 aaKnown RBP22.82■■□□□ 1.24
DDR1-280ENST00000515881 PTGS1P23219 599 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 FSCN1Q16658 493 aaKnown RBP22.82■■□□□ 1.24
DDR1-280ENST00000515881 QRICH1Q2TAL8 776 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 KIAA1211Q6ZU35 1233 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 STAG2Q8N3U4 1231 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 DNERQ8NFT8 737 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 NCOA7Q8NI08 942 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 MAF1Q9H063 256 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 Q9Y3F1 56 aa22.82■■□□□ 1.24
DDR1-280ENST00000515881 LCTP09848 1927 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 LTBP2Q14767 1821 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 A0A0U1RQG5 324 aaPredicted RBP22.81■■□□□ 1.24
DDR1-280ENST00000515881 IFIT3O14879 490 aaKnown RBP22.81■■□□□ 1.24
DDR1-280ENST00000515881 DYNC1LI2O43237 492 aaPredicted RBP22.81■■□□□ 1.24
DDR1-280ENST00000515881 ITGB8P26012 769 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 FAAP100Q0VG06 881 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 TMEM63BQ5T3F8 832 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 GPR153Q6NV75 609 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 STOX1Q6ZVD7 989 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 VTI1AQ96AJ9 217 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 MPHOSPH6Q99547 160 aaKnown RBP22.81■■□□□ 1.24
DDR1-280ENST00000515881 VAT1LQ9HCJ6 419 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 TMEM39AQ9NV64 488 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 RBM8AQ9Y5S9 174 aaKnown RBP22.81■■□□□ 1.24
DDR1-280ENST00000515881 MROH7Q68CQ1 1323 aa22.81■■□□□ 1.24
DDR1-280ENST00000515881 ERICH2A1L162 156 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 KLRF2D3W0D1 207 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 EDNRBP24530 442 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 CDK7P50613 346 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 PDE4DQ08499 809 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 DUSP28Q4G0W2 176 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 CENPQQ7L2Z9 268 aaPredicted RBP22.8■■□□□ 1.24
DDR1-280ENST00000515881 FBXO11Q86XK2 927 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 MAD2L2Q9UI95 211 aa22.8■■□□□ 1.24
DDR1-280ENST00000515881 RBM47A0AV96 593 aaKnown RBP22.79■■□□□ 1.24
DDR1-280ENST00000515881 ARVCFO00192 962 aa22.79■■□□□ 1.24
DDR1-280ENST00000515881 CABYRO75952 493 aa22.79■■□□□ 1.24
DDR1-280ENST00000515881 RAG1P15918 1043 aa22.79■■□□□ 1.24
DDR1-280ENST00000515881 SART3Q15020 963 aaKnown RBP22.79■■□□□ 1.24
DDR1-280ENST00000515881 CXCL17Q6UXB2 119 aa22.79■■□□□ 1.24
DDR1-280ENST00000515881 WDR11Q9BZH6 1224 aa22.79■■□□□ 1.24
DDR1-280ENST00000515881 PALM3A6NDB9 673 aaPredicted RBP22.78■■□□□ 1.24
DDR1-280ENST00000515881 B4DLN1 442 aa22.78■■□□□ 1.24
DDR1-280ENST00000515881 ZEB2O60315 1214 aa22.78■■□□□ 1.24
DDR1-280ENST00000515881 MRPL12P52815 198 aaKnown RBP22.78■■□□□ 1.24
DDR1-280ENST00000515881 WTAPQ15007 396 aa22.78■■□□□ 1.24
DDR1-280ENST00000515881 MCF2L2Q86YR7 1114 aa22.78■■□□□ 1.24
DDR1-280ENST00000515881 TBC1D5Q92609 795 aa22.78■■□□□ 1.24
DDR1-280ENST00000515881 SENP2Q9HC62 589 aa22.78■■□□□ 1.24
DDR1-280ENST00000515881 MRPL11Q9Y3B7 192 aaKnown RBP22.78■■□□□ 1.24
DDR1-280ENST00000515881 DNAH12Q6ZR08 3092 aa22.78■■□□□ 1.24
DDR1-280ENST00000515881 GRM4Q14833 912 aa22.77■■□□□ 1.24
DDR1-280ENST00000515881 SHHQ15465 462 aa22.77■■□□□ 1.24
DDR1-280ENST00000515881 CHST3Q7LGC8 479 aa22.77■■□□□ 1.24
DDR1-280ENST00000515881 MB21D2Q8IYB1 491 aaPredicted RBP22.77■■□□□ 1.24
DDR1-280ENST00000515881 SYTL5Q8TDW5 730 aaPredicted RBP22.77■■□□□ 1.24
DDR1-280ENST00000515881 ESYT1Q9BSJ8 1104 aa22.77■■□□□ 1.24
DDR1-280ENST00000515881 AMNQ9BXJ7 453 aa22.77■■□□□ 1.24
DDR1-280ENST00000515881 LSG1Q9H089 658 aaKnown RBP22.77■■□□□ 1.24
DDR1-280ENST00000515881 TBX21Q9UL17 535 aa22.77■■□□□ 1.24
DDR1-280ENST00000515881 ANTXR2P58335 489 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 TMEM67Q5HYA8 995 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 C9orf50Q5SZB4 431 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 SKAP1Q86WV1 359 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 FAM126BQ8IXS8 530 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 SLC43A3Q8NBI5 491 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 MTMR8Q96EF0 704 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 COL20A1Q9P218 1284 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 LAMA3Q16787 3333 aa22.76■■□□□ 1.23
DDR1-280ENST00000515881 ZBTB5O15062 677 aa22.75■■□□□ 1.23
DDR1-280ENST00000515881 TROAPQ12815 778 aa22.75■■□□□ 1.23
DDR1-280ENST00000515881 PPP2R5BQ15173 497 aa22.75■■□□□ 1.23
DDR1-280ENST00000515881 BMP2KLQ5H9B9 411 aa22.75■■□□□ 1.23
DDR1-280ENST00000515881 NSUN6Q8TEA1 469 aaKnown RBP22.75■■□□□ 1.23
DDR1-280ENST00000515881 SCFD2Q8WU76 684 aa22.75■■□□□ 1.23
DDR1-280ENST00000515881 TAAR1Q96RJ0 339 aa22.75■■□□□ 1.23
DDR1-280ENST00000515881 SZT2Q5T011 3432 aa22.75■■□□□ 1.23
DDR1-280ENST00000515881 NKRFO15226 690 aaKnown RBP eCLIP22.74■■□□□ 1.23
DDR1-280ENST00000515881 TLR3O15455 904 aaKnown RBP22.74■■□□□ 1.23
DDR1-280ENST00000515881 PPP1R11O60927 126 aaPredicted RBP22.74■■□□□ 1.23
DDR1-280ENST00000515881 TIMP1P01033 207 aa22.74■■□□□ 1.23
DDR1-280ENST00000515881 FPGSQ05932 587 aa22.74■■□□□ 1.23
DDR1-280ENST00000515881 ITGA7Q13683 1181 aa22.74■■□□□ 1.23
DDR1-280ENST00000515881 SLC35G1Q2M3R5 365 aa22.74■■□□□ 1.23
DDR1-280ENST00000515881 OR6J1Q8NGC5 347 aa22.74■■□□□ 1.23
DDR1-280ENST00000515881 IGDCC4Q8TDY8 1250 aa22.74■■□□□ 1.23
DDR1-280ENST00000515881 OPLAHO14841 1288 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 CPT1AP50416 773 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 EPHB4P54760 987 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 CATIPQ7Z7H3 387 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 DEFB123Q8N688 67 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 RMDN3Q96TC7 470 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 SEZ6LQ9BYH1 1024 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 RIOX1Q9H6W3 641 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 GRIN2DO15399 1336 aa22.73■■□□□ 1.23
DDR1-280ENST00000515881 CFBP00751 764 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 CD4P01730 458 aa22.72■■□□□ 1.23
DDR1-280ENST00000515881 TXNP10599 105 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms