RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 PDRG1Q9NUG6 133 aa18.41■□□□□ 0.54
SDHAP3-202ENST00000515467 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.41■□□□□ 0.54
SDHAP3-202ENST00000515467 DDX20Q9UHI6 824 aaKnown RBP18.41■□□□□ 0.54
SDHAP3-202ENST00000515467 OGDHLQ9ULD0 1010 aa18.41■□□□□ 0.54
SDHAP3-202ENST00000515467 PPP1R11O60927 126 aaPredicted RBP18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 SEC24BO95487 1268 aa18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 SNAI1O95863 264 aaPredicted RBP18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 METAP2P50579 478 aaKnown RBP eCLIP18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 EVCP57679 992 aa18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 PRAMEF19Q5SWL8 479 aa18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 LHX8Q68G74 356 aa18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 ARMCX2Q7L311 632 aa18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 PIBF1Q8WXW3 757 aa18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 UPF3BQ9BZI7 483 aaKnown RBP18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 ALDH8A1Q9H2A2 487 aaPredicted RBP18.4■□□□□ 0.54
SDHAP3-202ENST00000515467 ACVR2BQ13705 512 aa18.39■□□□□ 0.53
SDHAP3-202ENST00000515467 SLC30A10Q6XR72 485 aa18.39■□□□□ 0.53
SDHAP3-202ENST00000515467 CCDC82Q8N4S0 544 aa18.39■□□□□ 0.53
SDHAP3-202ENST00000515467 SHISA4Q96DD7 197 aa18.39■□□□□ 0.53
SDHAP3-202ENST00000515467 FAM184BQ9ULE4 1060 aa18.39■□□□□ 0.53
SDHAP3-202ENST00000515467 ZNFX1Q9P2E3 1918 aaKnown RBP18.39■□□□□ 0.53
SDHAP3-202ENST00000515467 CFBP00751 764 aa18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 ZNF865P0CJ78 1059 aaPredicted RBP18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 AKR1A1P14550 325 aa18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 ALDH5A1P51649 535 aaPredicted RBP18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 GHRHRQ02643 423 aa18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 ANKRD1Q15327 319 aa18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 CMTR1Q8N1G2 835 aaKnown RBP18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 SYTL5Q8TDW5 730 aaPredicted RBP18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 MORC4Q8TE76 937 aa18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 TBC1D5Q92609 795 aa18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 ZNF274Q96GC6 653 aaPredicted RBP18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 CENPFP49454 3210 aa18.38■□□□□ 0.53
SDHAP3-202ENST00000515467 GCOM1H8Y6P7 765 aaPredicted RBP18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 FARP2O94887 1054 aaPredicted RBP18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 POLR2MP0CAP2 368 aa18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 RARBP10826 455 aa18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 PDIA3P30101 505 aaKnown RBP18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 HSD17B4P51659 736 aa18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 ARRDC4Q8NCT1 418 aa18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 NSUN6Q8TEA1 469 aaKnown RBP18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 FAM217BQ9NTX9 383 aaPredicted RBP18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 ZHX1Q9UKY1 873 aaPredicted RBP18.37■□□□□ 0.53
SDHAP3-202ENST00000515467 CDC27P30260 824 aa18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 ADD1P35611 737 aaKnown RBP18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 PDE4DQ08499 809 aa18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 FUT2Q10981 343 aa18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 PRPF38BQ5VTL8 546 aaKnown RBP18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 PURBQ96QR8 312 aaKnown RBP18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 IWS1Q96ST2 819 aa18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 RMDN3Q96TC7 470 aa18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 UPF2Q9HAU5 1272 aaKnown RBP18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 VTA1Q9NP79 307 aa18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 V9GY48 417 aaPredicted RBP18.36■□□□□ 0.53
SDHAP3-202ENST00000515467 NID2Q14112 1375 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 ASTN1O14525 1302 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 hCG_1984214I3L0E3 225 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 OPLAHO14841 1288 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 IQSEC1Q6DN90 963 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 UBE2Q1Q7Z7E8 422 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 TEX2Q8IWB9 1127 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 ZNF713Q8N859 430 aaPredicted RBP18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 CUL5Q93034 780 aa18.35■□□□□ 0.53
SDHAP3-202ENST00000515467 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 EDNRBP24530 442 aa18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 AKAP17AQ02040 695 aaKnown RBP18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 CCDC144BQ3MJ40 725 aa18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 ARHGEF16Q5VV41 709 aa18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 CPLX2Q6PUV4 134 aaKnown RBP18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 KATNBL1Q9H079 304 aa18.34■□□□□ 0.53
SDHAP3-202ENST00000515467 RBBP6Q7Z6E9 1792 aaKnown RBP18.33■□□□□ 0.53
SDHAP3-202ENST00000515467 BAZ2BQ9UIF8 2168 aaKnown RBP18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 hCG_1642624A0A1W2PR95 340 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 DUSP11O75319 330 aaKnown RBP18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 HEATR3Q7Z4Q2 680 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 HTATIP2Q9BUP3 242 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 C22orf23Q9BZE7 217 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 PSTPIP2Q9H939 334 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 SPC25Q9HBM1 224 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 XPNPEP3Q9NQH7 507 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 SMCHD1A6NHR9 2005 aa18.33■□□□□ 0.52
SDHAP3-202ENST00000515467 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 CPLX1O14810 134 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 PRPF3O43395 683 aaKnown RBP18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 IFNAR1P17181 557 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 HOXA13P31271 388 aaPredicted RBP18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 NEK4P51957 841 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 TNFAIP2Q03169 654 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 STXBP2Q15833 593 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 ANO1Q5XXA6 986 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 PPP1R18Q6NYC8 613 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 RNF180Q86T96 592 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 PAWRQ96IZ0 340 aaKnown RBP18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 GLT8D2Q9H1C3 349 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 PXMP2Q9NR77 195 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms