RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 USP17L4A6NCW7 530 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 EXOC3O60645 756 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 CLTAP09496 248 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 GGCXP38435 758 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 PRPHP41219 470 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 MTMR3Q13615 1198 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 USP17L1Q7RTZ2 530 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 CELF1Q92879 486 aaKnown RBP14.44□□□□□ -0.1
TCOF1-213ENST00000514442 EEF2KMTQ96G04 330 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 CSRNP2Q9H175 543 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 DDX25Q9UHL0 483 aaKnown RBP14.44□□□□□ -0.1
TCOF1-213ENST00000514442 GSTA5Q7RTV2 222 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 KIDINS220Q9ULH0 1771 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 UBXN2AP68543 259 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 RBL2Q08999 1139 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 ASIC2Q16515 512 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 ALS2CLQ60I27 953 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 TRIML1Q8N9V2 468 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 NUP58Q9BVL2 599 aa14.44□□□□□ -0.1
TCOF1-213ENST00000514442 SMIM24O75264 130 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 PCP11498 1178 aaKnown RBP14.43□□□□□ -0.1
TCOF1-213ENST00000514442 STRN3Q13033 797 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 WDR44Q5JSH3 913 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 PACS2Q86VP3 889 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 CCDC63Q8NA47 563 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 PPFIBP2Q8ND30 876 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 TSKSQ9UJT2 592 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 CRB1P82279 1406 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 SMIM23A6NLE4 172 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 TNFAIP3P21580 790 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 PPARDQ03181 441 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 CLEC4GQ6UXB4 293 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 MIER3Q7Z3K6 550 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 RPUSD2Q8IZ73 545 aaKnown RBP14.43□□□□□ -0.1
TCOF1-213ENST00000514442 CEP120Q8N960 986 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 TRIM58Q8NG06 486 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 GOLPH3LQ9H4A5 285 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 NLRC4Q9NPP4 1024 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 LRRD1A4D1F6 860 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 GUCY2FP51841 1108 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 KIF23Q02241 960 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-213ENST00000514442 SUGP1Q8IWZ8 645 aaKnown RBP14.43□□□□□ -0.1
TCOF1-213ENST00000514442 STRBPQ96SI9 672 aaKnown RBP14.43□□□□□ -0.1
TCOF1-213ENST00000514442 RNF26Q9BY78 433 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-213ENST00000514442 ATP6V0A2Q9Y487 856 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 PRDX5P30044 214 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 CASP14P31944 242 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 NNTQ13423 1086 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 WDR24Q96S15 920 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 TRIM4Q9C037 500 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 NT5C3AQ9H0P0 336 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 KLC4Q9NSK0 619 aa14.43□□□□□ -0.1
TCOF1-213ENST00000514442 FLOT1O75955 427 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 ACTN3Q08043 901 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-213ENST00000514442 USP17L2Q6R6M4 530 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 OR8K1Q8NGG5 319 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 NOX5Q96PH1 765 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 PIGSQ96S52 555 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 GJB4Q9NTQ9 266 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 LCMT1Q9UIC8 334 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 PCDHB13Q9Y5F0 798 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 ENC1O14682 589 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 POLR2MP0CAP2 368 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 CYP2D6P10635 497 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
TCOF1-213ENST00000514442 FUT8Q9BYC5 575 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 PPP1R12CQ9BZL4 782 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 POLR3EQ9NVU0 708 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 NARFQ9UHQ1 456 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 MINPP1Q9UNW1 487 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 ATF5Q9Y2D1 282 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-213ENST00000514442 EPN1Q9Y6I3 576 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-213ENST00000514442 ADAMTS13Q76LX8 1427 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 SLC39A14Q15043 492 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 INTS8Q75QN2 995 aaKnown RBP14.42□□□□□ -0.1
TCOF1-213ENST00000514442 PSMB7Q99436 277 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 HYOU1Q9Y4L1 999 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 CSADQ9Y600 493 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 GCFC2P16383 781 aaKnown RBP14.42□□□□□ -0.1
TCOF1-213ENST00000514442 ARHGEF16Q5VV41 709 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 LRRC31Q6UY01 552 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 NLRX1Q86UT6 975 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 TBC1D10CQ8IV04 446 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 AZI2Q9H6S1 392 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 SLC39A2Q9NP94 309 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 SERPINB13Q9UIV8 391 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 FAM184BQ9ULE4 1060 aa14.42□□□□□ -0.1
TCOF1-213ENST00000514442 PLEKHG2Q9H7P9 1386 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 MORC3Q14149 939 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 TRIM68Q6AZZ1 485 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 ZNF354CQ86Y25 554 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 GRAMD1CQ8IYS0 662 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 LINC00301Q8NCQ3 95 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 CCDC26Q8TAB7 109 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 ISCA1Q9BUE6 129 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 VIPAS39Q9H9C1 493 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 ZNF446Q9NWS9 450 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 KCNJ18B7U540 433 aa14.41□□□□□ -0.1
TCOF1-213ENST00000514442 CACNB3P54284 484 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms