RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CABYRO75952 493 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 BAIAP3O94812 1187 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 ZIC2O95409 532 aaPredicted RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 BAG3O95817 575 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 NDUFV1P49821 464 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 SMAD4Q13485 552 aaKnown RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 TATDN1Q6P1N9 297 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 MAMDC4Q6UXC1 1216 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 RIOX2Q8IUF8 465 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 MYOCDQ8IZQ8 938 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 DCLK2Q8N568 766 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 RIPOR3Q96MK2 946 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 HS3ST6Q96QI5 342 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 INCENPQ9NQS7 918 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 HMG20BQ9P0W2 317 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 RIPK3Q9Y572 518 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 PCDHGC5Q9Y5F6 944 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 GUCY1A2P33402 732 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 HYAL1Q12794 435 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 RSPO4Q2I0M5 234 aaPredicted RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 SNRNP48Q6IEG0 339 aaKnown RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 NAA16Q6N069 864 aaPredicted RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 CPXCR1Q8N123 301 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 SPATA5Q8NB90 893 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 NEUROD6Q96NK8 337 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 AP5M1Q9H0R1 490 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 DLL3Q9NYJ7 618 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 CD207Q9UJ71 328 aa3.99□□□□□ -1.77
CHD1-211ENST00000514344 ZNF214Q9UL59 606 aaPredicted RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 PA2G4Q9UQ80 394 aaKnown RBP3.99□□□□□ -1.77
CHD1-211ENST00000514344 MYO10Q9HD67 2058 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 VWA5AO00534 786 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 UPP2O95045 317 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 TIE1P35590 1138 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 RFX5P48382 616 aaPredicted RBP3.98□□□□□ -1.77
CHD1-211ENST00000514344 DYNLL1P63167 89 aaKnown RBP3.98□□□□□ -1.77
CHD1-211ENST00000514344 TCTN1Q2MV58 587 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 CTC1Q2NKJ3 1217 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 ANKRD35Q8N283 1001 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 MIGA1Q8NAN2 632 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 XAGE2Q96GT9 111 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 PDGFCQ9NRA1 345 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 SNRKQ9NRH2 765 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 INSL6Q9Y581 213 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 R4GN57 208 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 LAMA1P25391 3075 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 TANC1Q9C0D5 1861 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 A0A1B0GUL7 405 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 DCDC2BA2VCK2 349 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 LOC730098B7Z3J9 87 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 H3BNC9 293 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 ZEB2O60315 1214 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 MAP4K4O95819 1239 aaPredicted RBP3.98□□□□□ -1.77
CHD1-211ENST00000514344 LMNAP02545 664 aaKnown RBP3.98□□□□□ -1.77
CHD1-211ENST00000514344 ARP10275 920 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 PLCG2P16885 1265 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 SMPD1P17405 629 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 SHMT1P34896 483 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 RFC2P35250 354 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 USP5P45974 858 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 PLCD1P51178 756 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 CNTN2Q02246 1040 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 COL19A1Q14993 1142 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 GORABQ5T7V8 394 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.98□□□□□ -1.77
CHD1-211ENST00000514344 MSL3Q8N5Y2 521 aaKnown RBP3.98□□□□□ -1.77
CHD1-211ENST00000514344 YME1L1Q96TA2 773 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 MFSD1Q9H3U5 465 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 SMOC2Q9H3U7 446 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 HOMER2Q9NSB8 354 aa3.98□□□□□ -1.77
CHD1-211ENST00000514344 GNEQ9Y223 722 aaKnown RBP3.98□□□□□ -1.77
CHD1-211ENST00000514344 MYH1P12882 1939 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 DNAJC25-GNG10A0A024R161 153 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 VAMP4O75379 141 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 MYL3P08590 195 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 RRP1P56182 461 aaKnown RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 GPNMBQ14956 572 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 FBXO11Q86XK2 927 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 FLCNQ8NFG4 579 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 CYP2W1Q8TAV3 490 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 FGD4Q96M96 766 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 GPHNQ9NQX3 736 aaPredicted RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 TSHZ2Q9NRE2 1034 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 BARX2Q9UMQ3 279 aaPredicted RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 CACNA1FO60840 1977 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 PARP14Q460N5 1801 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 ICAM3P32942 547 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 MCAMP43121 646 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 BFSP2Q13515 415 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 IKBKEQ14164 716 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 ANGPT1Q15389 498 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 PTPN21Q16825 1174 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 RBM23Q86U06 439 aaKnown RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 FBXO16Q8IX29 292 aaPredicted RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 TMEM192Q8IY95 271 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 SMRP1Q8NCR6 262 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 CCER1Q8TC90 406 aaPredicted RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 TEX13BQ9BXU2 312 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 KATNBL1Q9H079 304 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 USP15Q9Y4E8 981 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms