RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 AP1M1Q9BXS5 423 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 DNAJC17Q9NVM6 304 aaKnown RBP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 PARP3Q9Y6F1 533 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 GJA3Q9Y6H8 435 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 GAS7O60861 476 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 RESP18Q5W5W9 173 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 PPP1R21Q6ZMI0 780 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 METTL16Q86W50 562 aaKnown RBP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 VSIG1Q86XK7 387 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 RBM17Q96I25 401 aaKnown RBP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 NHEJ1Q9H9Q4 299 aaPredicted RBP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 SETBP1Q9Y6X0 1596 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 POTEMA6NI47 508 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 ATP2A1O14983 1001 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 FDPSP14324 419 aaKnown RBP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 TCP1P17987 556 aaKnown RBP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 PRCPP42785 496 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 FMR1Q06787 632 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
PRDM16-208ENST00000514189 CHP1Q99653 195 aa14.37□□□□□ -0.11
PRDM16-208ENST00000514189 FRMD3A2A2Y4 597 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 MFAP3LO75121 409 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 GDF11O95390 407 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 KRT15P19012 456 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 PPP1R2P41236 205 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 APBB1IPQ7Z5R6 666 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 LY9Q9HBG7 655 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 HDAC9Q9UKV0 1011 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 AMFRQ9UKV5 643 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 MROH1Q8NDA8 1641 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 PHLPP2Q6ZVD8 1323 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 CALUO43852 315 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 CTDNEP1O95476 244 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 COL9A3Q14050 684 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 MESDQ14696 234 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 RUFY4Q6ZNE9 571 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 PCIF1Q9H4Z3 704 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 IL6STP40189 918 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 FOXO4P98177 505 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 CLTAP09496 248 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 TNNI1P19237 187 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 GRM1Q13255 1194 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 ZNF658Q5TYW1 1059 aaPredicted RBP14.36□□□□□ -0.11
PRDM16-208ENST00000514189 FAM178BQ8IXR5 827 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 CCDC170Q8IYT3 715 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 PCDHA4Q9UN74 947 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 ATP8A1Q9Y2Q0 1164 aa14.36□□□□□ -0.11
PRDM16-208ENST00000514189 ZNF609O15014 1411 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 TTC26A0AVF1 554 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 CCZ1BP86790 482 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 CCZ1P86791 482 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 E2F5Q15329 346 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 EXOC3L4Q17RC7 722 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 CC2D1AQ6P1N0 951 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 PROCA1Q8NCQ7 364 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 TRIM10Q9UDY6 481 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 PACSIN2Q9UNF0 486 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 BCS1LQ9Y276 419 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 CLRN2A0PK11 232 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 TESPA1A2RU30 521 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 GSG1L2A8MUP6 293 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 RGS16O15492 202 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 ZKSCAN8Q15776 578 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 RIN2Q8WYP3 895 aaPredicted RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 MLXIPQ9HAP2 919 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 NCK2O43639 380 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 ALAS1P13196 640 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 EXOSC10Q01780 885 aaKnown RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 TCP11X2Q5H9J9 407 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 INTS8Q75QN2 995 aaKnown RBP14.35□□□□□ -0.11
PRDM16-208ENST00000514189 CARD10Q9BWT7 1032 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 DBNDD1Q9H9R9 158 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 NFU1Q9UMS0 254 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 ADAMTS13Q76LX8 1427 aa14.35□□□□□ -0.11
PRDM16-208ENST00000514189 PDE4DIPQ5VU43 2346 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 PLTPP55058 493 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 SLFN13Q68D06 897 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 DCUN1D2Q6PH85 259 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 TBC1D31Q96DN5 1066 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 KAZALD1Q96I82 304 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 WDR17Q8IZU2 1322 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 TBC1D8O95759 1140 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 HOXA13P31271 388 aaPredicted RBP14.34□□□□□ -0.11
PRDM16-208ENST00000514189 BSPRYQ5W0U4 402 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 UBL4BQ8N7F7 174 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 FAM71BQ8TC56 605 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 CD2APQ9Y5K6 639 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 CRB1P82279 1406 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
PRDM16-208ENST00000514189 DDAH1O94760 285 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms