RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 PPM1EQ8WY54 764 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 CCSER1Q9C0I3 900 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 ZCCHC17Q9NP64 241 aaKnown RBP14.05□□□□□ -0.16
SDHA-216ENST00000514027 MAGEC2Q9UBF1 373 aaPredicted RBP14.05□□□□□ -0.16
SDHA-216ENST00000514027 POLLQ9UGP5 575 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 LRRC10BA6NIK2 292 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 USP17L5A8MUK1 530 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 KLRC4O43908 158 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 GYS1P13807 737 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 PRPHP41219 470 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 LMAN1P49257 510 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 RHBDL3P58872 404 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 ASIC1P78348 528 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 CYP26C1Q6V0L0 522 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 TMTC1Q8IUR5 882 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 KBTBD4Q9NVX7 518 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 TMEM260Q9NX78 707 aa14.05□□□□□ -0.16
SDHA-216ENST00000514027 EIF3CLB5ME19 914 aaKnown RBP14.04□□□□□ -0.16
SDHA-216ENST00000514027 RIMBP2O15034 1052 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 KCNB1Q14721 858 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 MEX3CQ5U5Q3 659 aaKnown RBP14.04□□□□□ -0.16
SDHA-216ENST00000514027 IRF2BP1Q8IU81 584 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 LRRC47Q8N1G4 583 aaKnown RBP14.04□□□□□ -0.16
SDHA-216ENST00000514027 TBCKQ8TEA7 893 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 GOLGA1Q92805 767 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 EIF3CQ99613 913 aaKnown RBP14.04□□□□□ -0.16
SDHA-216ENST00000514027 SLF1Q9BQI6 1058 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 EXOC1Q9NV70 894 aa14.04□□□□□ -0.16
SDHA-216ENST00000514027 SASH3O75995 380 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 RHOBTB3O94955 611 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 ABL1P00519 1130 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 GTF2IP78347 998 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 PDE4DQ08499 809 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 SMC1AQ14683 1233 aaKnown RBP14.03□□□□□ -0.16
SDHA-216ENST00000514027 KIF4BQ2VIQ3 1234 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 CRY2Q49AN0 593 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 DNAJC21Q5F1R6 531 aaKnown RBP14.03□□□□□ -0.16
SDHA-216ENST00000514027 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 CLEC10AQ8IUN9 316 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 REXO1Q8N1G1 1221 aaKnown RBP14.03□□□□□ -0.16
SDHA-216ENST00000514027 TBC1D16Q8TBP0 767 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 CCDC47Q96A33 483 aaKnown RBP14.03□□□□□ -0.16
SDHA-216ENST00000514027 PUF60Q9UHX1 559 aaKnown RBP14.03□□□□□ -0.16
SDHA-216ENST00000514027 TTF2Q9UNY4 1162 aaKnown RBP14.03□□□□□ -0.16
SDHA-216ENST00000514027 TXKP42681 527 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 LEKR1Q6ZMV7 388 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 MMS22LQ6ZRQ5 1243 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 CSGALNACT2Q8N6G5 542 aa14.03□□□□□ -0.16
SDHA-216ENST00000514027 GIMAP8Q8ND71 665 aaPredicted RBP14.03□□□□□ -0.16
SDHA-216ENST00000514027 TTC26A0AVF1 554 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 LGALS16A8MUM7 142 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 B4DLN1 442 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 TBC1D8O95759 1140 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 CPP00450 1065 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 MYL1P05976 194 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 MB21D1Q8N884 522 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 TBC1D22AQ8WUA7 517 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 COA7Q96BR5 231 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 AK8Q96MA6 479 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 CEP89Q96ST8 783 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 THAP9Q9H5L6 903 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 DAGLAQ9Y4D2 1042 aa14.02□□□□□ -0.16
SDHA-216ENST00000514027 CTAGE9A4FU28 777 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 PDHBP11177 359 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 FCER1AP12319 257 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 FECHP22830 423 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 EEF1GP26641 437 aaKnown RBP14.02□□□□□ -0.17
SDHA-216ENST00000514027 MAP2K2P36507 400 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 CHMP4BP1P59074 171 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 GPR161Q8N6U8 529 aaKnown RBP14.02□□□□□ -0.17
SDHA-216ENST00000514027 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.17
SDHA-216ENST00000514027 CHP1Q99653 195 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 TRIM9Q9C026 710 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 ADAM21Q9UKJ8 722 aa14.02□□□□□ -0.17
SDHA-216ENST00000514027 CCDC189A1A4V9 331 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 HSPA1LP34931 641 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 NBPF20Q3BBV1 942 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 TTI2Q6NXR4 508 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 DPP8Q6V1X1 898 aaPredicted RBP14.01□□□□□ -0.17
SDHA-216ENST00000514027 RSRC2Q7L4I2 434 aaKnown RBP14.01□□□□□ -0.17
SDHA-216ENST00000514027 HPS3Q969F9 1004 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 CALML4Q96GE6 196 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 PCMTD1Q96MG8 357 aaPredicted RBP14.01□□□□□ -0.17
SDHA-216ENST00000514027 CUEDC2Q9H467 287 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 LUC7L2Q9Y383 392 aaKnown RBP14.01□□□□□ -0.17
SDHA-216ENST00000514027 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.01□□□□□ -0.17
SDHA-216ENST00000514027 GAKO14976 1311 aa14.01□□□□□ -0.17
SDHA-216ENST00000514027 CORO7P57737 925 aa14□□□□□ -0.17
SDHA-216ENST00000514027 STK4Q13043 487 aa14□□□□□ -0.17
SDHA-216ENST00000514027 TSR1Q2NL82 804 aaKnown RBP14□□□□□ -0.17
SDHA-216ENST00000514027 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
SDHA-216ENST00000514027 PARD6BQ9BYG5 372 aa14□□□□□ -0.17
SDHA-216ENST00000514027 MAGEF1Q9HAY2 307 aa14□□□□□ -0.17
SDHA-216ENST00000514027 UBR3Q6ZT12 1888 aa14□□□□□ -0.17
SDHA-216ENST00000514027 SPATA31A6Q5VVP1 1343 aa14□□□□□ -0.17
SDHA-216ENST00000514027 BBOX1O75936 387 aa14□□□□□ -0.17
SDHA-216ENST00000514027 TFRCP02786 760 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms