RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 MECOMQ03112 1051 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 TRIM26Q12899 539 aaPredicted RBP9.41□□□□□ -0.9
CLDND1-229ENST00000513988 BFSP2Q13515 415 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 CCDC146Q8IYE0 955 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 SMRP1Q8NCR6 262 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 MSLNLQ96KJ4 702 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 RTKNQ9BST9 563 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 AP5M1Q9H0R1 490 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 IFT57Q9NWB7 429 aa9.41□□□□□ -0.9
CLDND1-229ENST00000513988 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.41□□□□□ -0.9
CLDND1-229ENST00000513988 C9orf78Q9NZ63 289 aaPredicted RBP9.41□□□□□ -0.9
CLDND1-229ENST00000513988 FLOT1O75955 427 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 GTF2F1P35269 517 aaKnown RBP eCLIP9.4□□□□□ -0.9
CLDND1-229ENST00000513988 TMEM132BQ14DG7 1078 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 LRRFIP1Q32MZ4 808 aaKnown RBP9.4□□□□□ -0.9
CLDND1-229ENST00000513988 CNKSR3Q6P9H4 555 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 ATF7IPQ6VMQ6 1270 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 TLK2Q86UE8 772 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 CCDC105Q8IYK2 499 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 UBALD2Q8IYN6 164 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 TSPYL6Q8N831 410 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 KREMEN2Q8NCW0 462 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 DDX11Q96FC9 970 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 ANGPTL2Q9UKU9 493 aa9.4□□□□□ -0.9
CLDND1-229ENST00000513988 USP15Q9Y4E8 981 aaPredicted RBP9.4□□□□□ -0.9
CLDND1-229ENST00000513988 RALGAPA2Q2PPJ7 1873 aa9.4□□□□□ -0.91
CLDND1-229ENST00000513988 ASTN1O14525 1302 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 ABHD14A-ACY1A0A1B0GW23 586 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 PRR5-ARHGAP8B1AHC4 643 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 EFCAB14O75071 495 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 HLA-DOAP06340 250 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 PHKA1P46020 1223 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 GSTO1P78417 241 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 ARHGAP8P85298 464 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 ADAM15Q13444 863 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 FAM47CQ5HY64 1035 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 PPM1JQ5JR12 505 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 ERICH6Q7L0X2 663 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 FBXO11Q86XK2 927 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 RIOX2Q8IUF8 465 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 TMEM192Q8IY95 271 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 SH3RF3Q8TEJ3 882 aaPredicted RBP9.39□□□□□ -0.91
CLDND1-229ENST00000513988 MCM3APO60318 1980 aa9.39□□□□□ -0.91
CLDND1-229ENST00000513988 COPB2P35606 906 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 LMNB2Q03252 620 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 COASYQ13057 564 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 BEND3Q5T5X7 828 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 ZC3H14Q6PJT7 736 aaKnown RBP9.38□□□□□ -0.91
CLDND1-229ENST00000513988 MAPKAPK5Q8IW41 473 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 ZNF687Q8N1G0 1237 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
CLDND1-229ENST00000513988 MAGEB6Q8N7X4 407 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 DTWD2Q8NBA8 298 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 FLCNQ8NFG4 579 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 KLHDC4Q8TBB5 520 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 SUCLG2Q96I99 432 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 NOL10Q9BSC4 688 aaKnown RBP9.38□□□□□ -0.91
CLDND1-229ENST00000513988 LMAN2LQ9H0V9 348 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 CABP5Q9NP86 173 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 PALD1Q9ULE6 856 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 PCDHGA4Q9Y5G9 962 aa9.38□□□□□ -0.91
CLDND1-229ENST00000513988 ATG2AQ2TAZ0 1938 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 NBEAQ8NFP9 2946 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
CLDND1-229ENST00000513988 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
CLDND1-229ENST00000513988 DYNC1LI2O43237 492 aaPredicted RBP9.37□□□□□ -0.91
CLDND1-229ENST00000513988 PROS1P07225 676 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 STAT3P40763 770 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 IKBKEQ14164 716 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 ABCB5Q2M3G0 1257 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 CRIPAKQ8N1N5 446 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 CCDC155Q8N6L0 562 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 ZNF384Q8TF68 577 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 CLEC1BQ9P126 229 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 NCDNQ9UBB6 729 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 NOD1Q9Y239 953 aa9.37□□□□□ -0.91
CLDND1-229ENST00000513988 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 IGF2RP11717 2491 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 CSPG5O95196 566 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 BRD1O95696 1058 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 ATF7P17544 494 aaPredicted RBP9.36□□□□□ -0.91
CLDND1-229ENST00000513988 MCAMP43121 646 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 HTRA4P83105 476 aaPredicted RBP9.36□□□□□ -0.91
CLDND1-229ENST00000513988 CALD1Q05682 793 aaKnown RBP9.36□□□□□ -0.91
CLDND1-229ENST00000513988 RASGRF1Q13972 1273 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 LRSAM1Q6UWE0 723 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 ARMCX2Q7L311 632 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 PPP2R3CQ969Q6 453 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 KAZALD1Q96I82 304 aa9.36□□□□□ -0.91
CLDND1-229ENST00000513988 SAP30BPQ9UHR5 308 aaKnown RBP9.36□□□□□ -0.91
CLDND1-229ENST00000513988 GNEQ9Y223 722 aaKnown RBP9.36□□□□□ -0.91
CLDND1-229ENST00000513988 DSPP15924 2871 aaKnown RBP9.36□□□□□ -0.91
CLDND1-229ENST00000513988 TRIP12Q14669 1992 aaPredicted RBP9.35□□□□□ -0.91
CLDND1-229ENST00000513988 FLT1P17948 1338 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms