RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 WDR18Q9BV38 432 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 ZNF341Q9BYN7 854 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 GTPBP4Q9BZE4 634 aaKnown RBP9.47□□□□□ -0.89
RNF4-220ENST00000513578 KIAA1683Q9H0B3 1180 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 DISC1Q9NRI5 854 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 HACL1Q9UJ83 578 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 PNMA2Q9UL42 364 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 PITPNM2Q9BZ72 1349 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 PAPPA2Q9BXP8 1791 aa9.47□□□□□ -0.89
RNF4-220ENST00000513578 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 TBX3O15119 743 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 WDR46O15213 610 aaKnown RBP9.46□□□□□ -0.9
RNF4-220ENST00000513578 EGFRP00533 1210 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 CYP3A4P08684 503 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 PRR29P0C7W0 189 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 FDX1P10109 184 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 CIITAP33076 1130 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 UBA7P41226 1012 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 GHRHRQ02643 423 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 KIAA1755Q5JYT7 1200 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 MIGA2Q7L4E1 593 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 SAMD7Q7Z3H4 446 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 AOPEPQ8N6M6 819 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 PDILTQ8N807 584 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 ENOX1Q8TC92 643 aaKnown RBP9.46□□□□□ -0.9
RNF4-220ENST00000513578 NUP88Q99567 741 aaPredicted RBP9.46□□□□□ -0.9
RNF4-220ENST00000513578 ANO3Q9BYT9 981 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 RAB34Q9BZG1 259 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 KBTBD4Q9NVX7 518 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 RLFQ13129 1914 aa9.46□□□□□ -0.9
RNF4-220ENST00000513578 BIN1O00499 593 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 BMP6P22004 513 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 SREBF1P36956 1147 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 STAT6P42226 847 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 USP14P54578 494 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 MYL5Q02045 173 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 DHX8Q14562 1220 aaKnown RBP9.45□□□□□ -0.9
RNF4-220ENST00000513578 KCNB1Q14721 858 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 CALCRLQ16602 461 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 UBE2SQ16763 222 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 TMEM266Q2M3C6 531 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 Q4G0T1 1027 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 TBC1D10BQ4KMP7 808 aaPredicted RBP9.45□□□□□ -0.9
RNF4-220ENST00000513578 NAALADL2Q58DX5 795 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 FAM83BQ5T0W9 1011 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 RRAGBQ5VZM2 374 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 ARHGAP27Q6ZUM4 889 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 CABP7Q86V35 215 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 SYT17Q9BSW7 474 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 TRIM5Q9C035 493 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 MAF1Q9H063 256 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 KCNMB3Q9NPA1 279 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 MAP3K20Q9NYL2 800 aaKnown RBP9.45□□□□□ -0.9
RNF4-220ENST00000513578 STK17AQ9UEE5 414 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 ZKSCAN5Q9Y2L8 839 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 MRPL11Q9Y3B7 192 aaKnown RBP9.45□□□□□ -0.9
RNF4-220ENST00000513578 STK24Q9Y6E0 443 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 ABCB11O95342 1321 aa9.45□□□□□ -0.9
RNF4-220ENST00000513578 LOXHD1Q8IVV2 1947 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 OPLAHO14841 1288 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 TDP2O95551 362 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 CLCN1P35523 988 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 IKQ13123 557 aaPredicted RBP9.44□□□□□ -0.9
RNF4-220ENST00000513578 NOL9Q5SY16 702 aaKnown RBP9.44□□□□□ -0.9
RNF4-220ENST00000513578 HYIQ5T013 277 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 CNNM4Q6P4Q7 775 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 SLFN12Q8IYM2 578 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 SCYL3Q8IZE3 742 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 C12orf42Q96LP6 360 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 MTRQ99707 1265 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 MMTAG2Q9BU76 263 aaKnown RBP9.44□□□□□ -0.9
RNF4-220ENST00000513578 FHDC1Q9C0D6 1143 aaPredicted RBP9.44□□□□□ -0.9
RNF4-220ENST00000513578 HSD3B7Q9H2F3 369 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 AS3MTQ9HBK9 375 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 DDX25Q9UHL0 483 aaKnown RBP9.44□□□□□ -0.9
RNF4-220ENST00000513578 RABGAP1Q9Y3P9 1069 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 WDR90Q96KV7 1748 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 PTPRFP10586 1907 aa9.44□□□□□ -0.9
RNF4-220ENST00000513578 SCN4AP35499 1836 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 ASTN2O75129 1339 aaPredicted RBP9.43□□□□□ -0.9
RNF4-220ENST00000513578 A0A087WWV3 80 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 SPDYE3A6NKU9 549 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 C19orf81C9J6K1 198 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 SLC37A4O43826 429 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 RAD21O60216 631 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 ZNF500O60304 480 aaPredicted RBP9.43□□□□□ -0.9
RNF4-220ENST00000513578 PTMAP06454 111 aaKnown RBP9.43□□□□□ -0.9
RNF4-220ENST00000513578 PPP1R2P41236 205 aa9.43□□□□□ -0.9
RNF4-220ENST00000513578 AFMP43652 599 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms