RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 TEX33O43247 280 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 TBC1D8O95759 1140 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 GNA14O95837 355 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 IVLP07476 585 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 TSPY3P0CV98 308 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 TSPY8P0CW00 308 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 HSPA8P11142 646 aaKnown RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 GCFC2P16383 781 aaKnown RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 ATP2B4P23634 1241 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 TM4SF1P30408 202 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 MCM7P33993 719 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 PRCPP42785 496 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 PLA2G4AP47712 749 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 FXR2P51116 673 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDR1-273ENST00000513514 TFAP4Q01664 338 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 UBXN1Q04323 297 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 SMC1AQ14683 1233 aaKnown RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 NFIXQ14938 502 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 LONRF2Q1L5Z9 754 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 TMEM266Q2M3C6 531 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 ASPRV1Q53RT3 343 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 HSP90B2PQ58FF3 399 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 SOGA3Q5TF21 947 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 KLHL10Q6JEL2 608 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 CHADLQ6NUI6 762 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 RAD9BQ6WBX8 426 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 USP49Q70CQ1 688 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 NBPF5PQ86XG9 351 aaPredicted RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 TRMT44Q8IYL2 757 aaKnown RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 TRIM58Q8NG06 486 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 NEDD1Q8NHV4 660 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDR1-273ENST00000513514 SYN2Q92777 582 aaPredicted RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 RRP36Q96EU6 259 aaKnown RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 FUT8Q9BYC5 575 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 EXOC1Q9NV70 894 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 MCM9Q9NXL9 1143 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 SEC63Q9UGP8 760 aaKnown RBP9.04□□□□□ -0.96
DDR1-273ENST00000513514 SWAP70Q9UH65 585 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 MYO6Q9UM54 1294 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 ATP8B3O60423 1300 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 PASKQ96RG2 1323 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 IRS2Q9Y4H2 1338 aa9.04□□□□□ -0.96
DDR1-273ENST00000513514 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.03□□□□□ -0.96
DDR1-273ENST00000513514 SOWAHDA6NJG2 315 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 STXBP3O00186 592 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 RPS6KA5O75582 802 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 DDNO94850 711 aaPredicted RBP9.03□□□□□ -0.96
DDR1-273ENST00000513514 OR52Z1P0C646 297 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 ATP2B1P20020 1258 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 ANXA13P27216 316 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 DYNLL1P63167 89 aaKnown RBP9.03□□□□□ -0.96
DDR1-273ENST00000513514 GRAPQ13588 217 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 SPA17Q15506 151 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 BEND6Q5SZJ8 279 aaPredicted RBP9.03□□□□□ -0.96
DDR1-273ENST00000513514 TTI2Q6NXR4 508 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 C16orf86Q6ZW13 317 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 ZNF572Q7Z3I7 529 aaPredicted RBP9.03□□□□□ -0.96
DDR1-273ENST00000513514 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 C2CD5Q86YS7 1000 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
DDR1-273ENST00000513514 GRAPLQ8TC17 118 aaPredicted RBP9.03□□□□□ -0.96
DDR1-273ENST00000513514 FAM71BQ8TC56 605 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 ZNF384Q8TF68 577 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 P2RX5Q93086 422 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 MAD2L2Q9UI95 211 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 PCDHA6Q9UN73 950 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 L1RE1Q9UN81 338 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 PCDHA8Q9Y5H6 950 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 SAR1BQ9Y6B6 198 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
DDR1-273ENST00000513514 GPR75-ASB3A0A0A6YYF3 556 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 KLRC4O43908 158 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 BBOX1O75936 387 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 LCA5LO95447 670 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 IL1R1P14778 569 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 FXR1P51114 621 aaKnown RBP eCLIP9.02□□□□□ -0.97
DDR1-273ENST00000513514 AMPD2Q01433 879 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 TRAF1Q13077 416 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 GLE1Q53GS7 698 aaKnown RBP9.02□□□□□ -0.97
DDR1-273ENST00000513514 EARS2Q5JPH6 523 aaKnown RBP9.02□□□□□ -0.97
DDR1-273ENST00000513514 PPP4R3AQ6IN85 833 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 CENPPQ6IPU0 288 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 SV2BQ7L1I2 683 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 TRAPPC11Q7Z392 1133 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 CABP7Q86V35 215 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 FMNL3Q8IVF7 1028 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 GRAMD1CQ8IYS0 662 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 CMTR1Q8N1G2 835 aaKnown RBP9.02□□□□□ -0.97
DDR1-273ENST00000513514 GUF1Q8N442 669 aaKnown RBP9.02□□□□□ -0.97
DDR1-273ENST00000513514 CSGALNACT2Q8N6G5 542 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 TTLL6Q8N841 843 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 RASSF8Q8NHQ8 419 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 SHISA4Q96DD7 197 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 MTRQ99707 1265 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 TUBGCP2Q9BSJ2 902 aa9.02□□□□□ -0.97
DDR1-273ENST00000513514 NT5C3AQ9H0P0 336 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms