RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PCDHA11Q9Y5I1 949 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 CEP350Q5VT06 3117 aa5.47□□□□□ -1.53
PDLIM5-218ENST00000513341 CLTCL1P53675 1640 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 NOTOA8MTQ0 251 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 GFRA2O00451 464 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 GRIN3BO60391 1043 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 CILPO75339 1184 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 ZBTB7AO95365 584 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 HSPA6P17066 643 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 ENOX2Q16206 610 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 SLC15A2Q16348 729 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 GPR162Q16538 588 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 ZFYVE27Q5T4F4 411 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 TCP11L2Q8N4U5 519 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 XAGE3Q8WTP9 111 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 CNTD2Q9H8S5 307 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 SIRT5Q9NXA8 310 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 TJP2Q9UDY2 1190 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 EBF1Q9UH73 591 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 PPLO60437 1756 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 CASZ1Q86V15 1759 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 ANKARQ7Z5J8 1434 aa5.46□□□□□ -1.54
PDLIM5-218ENST00000513341 KNDC1Q76NI1 1749 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 DHX57Q6P158 1386 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 ANKRD30BQ9BXX2 1392 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 DLC1Q96QB1 1528 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 ABLIM1O14639 778 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 SUV39H1O43463 412 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 TEKQ02763 1124 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 PLP2Q04941 152 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 DSC3Q14574 896 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 OLFML2BQ68BL8 750 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 TMEFF1Q8IYR6 380 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 PMFBP1Q8TBY8 1022 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 FBF1Q8TES7 1133 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 G6PC3Q9BUM1 346 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 STK32BQ9NY57 414 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 NRKQ7Z2Y5 1582 aa5.45□□□□□ -1.54
PDLIM5-218ENST00000513341 PLEKHH1Q9ULM0 1364 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 ALS2Q96Q42 1657 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 RBM47A0AV96 593 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 BCL9O00512 1426 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 INSRRP14616 1297 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 EPHB3P54753 998 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 SV2BQ7L1I2 683 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 FAM129CQ86XR2 697 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 MCATQ8IVS2 390 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 ZDHHC14Q8IZN3 488 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 TMEM87BQ96K49 555 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 PDGFDQ9GZP0 370 aaPredicted RBP5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 YTHDC2Q9H6S0 1430 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 C14orf93Q9H972 538 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 USP35Q9P2H5 1018 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 ADAM30Q9UKF2 790 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 USTQ9Y2C2 406 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 ADGRF5Q8IZF2 1346 aa5.44□□□□□ -1.54
PDLIM5-218ENST00000513341 MYOM1P52179 1685 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 EIF3AQ14152 1382 aaKnown RBP5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 KIAA0232Q92628 1395 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 TRPM3Q9HCF6 1732 aaPredicted RBP5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 OVOS2A0A0G2JMS6 1433 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 OVOS2A0A0J9YW53 1432 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 OVOS2Q6IE36 1432 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 CELA3AP09093 270 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 RPS26P62854 115 aaKnown RBP5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 PUM1Q14671 1186 aaKnown RBP eCLIP5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 TXNRD1Q16881 649 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 ADGRF1Q5T601 910 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 CNKSR3Q6P9H4 555 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 HHIPL2Q6UWX4 724 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 CRELD1Q96HD1 420 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 SBF2Q86WG5 1849 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 IFT172Q9UG01 1749 aa5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 PARP4Q9UKK3 1724 aaKnown RBP5.43□□□□□ -1.54
PDLIM5-218ENST00000513341 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 SSH2Q76I76 1423 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 AKAP8O43823 692 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 NRDCO43847 1150 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 FBXO24O75426 580 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 VIPR1P32241 457 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 KIR2DL1P43626 348 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 KIR2DL2P43627 348 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 ZC3H6P61129 1189 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 CHRNA2Q15822 529 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 DDB1Q16531 1140 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 TMC7Q7Z402 723 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 SYT8Q8NBV8 401 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 NGDNQ8NEJ9 315 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 MZB1Q8WU39 189 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 RNF141Q8WVD5 230 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 GPR20Q99678 358 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 ADAM7Q9H2U9 754 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 POGKQ9P215 609 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 CRYBG1Q9Y4K1 1723 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 CPDO75976 1380 aa5.42□□□□□ -1.54
PDLIM5-218ENST00000513341 PNMA6FA0A0J9YX94 578 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 RBAK-RBAKDNI3L0D1 243 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 PNLIPP16233 465 aa5.41□□□□□ -1.54
PDLIM5-218ENST00000513341 CDK8P49336 464 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms