RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TCHHQ07283 1943 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 ABCB11O95342 1321 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 DOCK5Q9H7D0 1870 aa8.77□□□□□ -1.01
HMGXB3-204ENST00000513318 PRPF3O43395 683 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 PEX10O60683 326 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 FKTNO75072 461 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 FMNL1O95466 1100 aaPredicted RBP8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 NUDT7P0C024 238 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 ALAS1P13196 640 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 ERCC3P19447 782 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 MAPK4P31152 587 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 SNAP25P60880 206 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 LACTBP83111 547 aaPredicted RBP8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 SSRP1Q08945 709 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 ST3GAL1Q11201 340 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 KIF22Q14807 665 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 CCDC83Q8IWF9 413 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 CCAR1Q8IX12 1150 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 NECAB1Q8N987 351 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 NSUN7Q8NE18 718 aaKnown RBP8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 CHST13Q8NET6 341 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 PHKBQ93100 1093 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 ERO1AQ96HE7 468 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 AGBL1Q96MI9 1066 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 SLC26A6Q9BXS9 759 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 MAF1Q9H063 256 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 PORCNQ9H237 461 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 MROH8Q9H579 483 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 ACAD9Q9H845 621 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 RNF146Q9NTX7 359 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 FBXO40Q9UH90 709 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 TSKSQ9UJT2 592 aa8.76□□□□□ -1.01
HMGXB3-204ENST00000513318 PTPDC1A2A3K4 754 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 TNPO2O14787 897 aaKnown RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 FOXN1O15353 648 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 EVI5O60447 810 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 PPP1R11O60927 126 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 DEXIO95424 95 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 CTDNEP1O95476 244 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 SCG2P13521 617 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 CTCFP49711 727 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 FCGRTP55899 365 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 HMGN5P82970 282 aaKnown RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 ARHGEF6Q15052 776 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 PFKFB3Q16875 520 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 Q3C1V9 767 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 USH1GQ495M9 461 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 WDR78Q5VTH9 848 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 PPP1R18Q6NYC8 613 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 NCAPG2Q86XI2 1143 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 ZNF296Q8WUU4 475 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 PIBF1Q8WXW3 757 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 EFCC1Q9HA90 598 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 CWC22Q9HCG8 908 aaKnown RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 HOMER2Q9NSB8 354 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 MRPL11Q9Y3B7 192 aaKnown RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 PCDHA1Q9Y5I3 950 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 IVNS1ABPQ9Y6Y0 642 aa8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 V9GY48 417 aaPredicted RBP8.75□□□□□ -1.01
HMGXB3-204ENST00000513318 hCG_1642624A0A1W2PR95 340 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 STRNO43815 780 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 GNRH1P01148 92 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 HSPA8P11142 646 aaKnown RBP8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 PSMC4P43686 418 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 SLC4A3P48751 1232 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 NAPAP54920 295 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 CUL4AQ13619 759 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 PKN1Q16512 942 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 MUM1L1Q5H9M0 696 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 WWC2Q6AWC2 1192 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 HEATR3Q7Z4Q2 680 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 GPR142Q7Z601 462 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 PLEKHH3Q7Z736 793 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 ABRAQ8N0Z2 381 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 FAM177A1Q8N128 213 aaPredicted RBP8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 CCDC148Q8NFR7 591 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 SMARCC2Q8TAQ2 1214 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 CD99L2Q8TCZ2 262 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 CCDC12Q8WUD4 166 aaPredicted RBP8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 SOCS4Q8WXH5 440 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 WASF1Q92558 559 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 GPKOWQ92917 476 aaPredicted RBP eCLIP8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 MARVELD3Q96A59 401 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 COA7Q96BR5 231 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 TRERF1Q96PN7 1200 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 BARHL2Q9NY43 387 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 ORC3Q9UBD5 711 aaPredicted RBP8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 KIF3AQ9Y496 699 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 RIPK3Q9Y572 518 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 PFASO15067 1338 aa8.74□□□□□ -1.01
HMGXB3-204ENST00000513318 MYH9P35579 1960 aaKnown RBP8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 ESYT2A0FGR8 921 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 STXBP3O00186 592 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 NFIBO00712 420 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 JAK2O60674 1132 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 FCER1AP12319 257 aa8.73□□□□□ -1.01
HMGXB3-204ENST00000513318 TAL1P17542 331 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms