RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 TRIM60Q495X7 471 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 FAM47AQ5JRC9 791 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 C12orf60Q5U649 245 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 TMED8Q6PL24 325 aaPredicted RBP7.07□□□□□ -1.28
GYPB-213ENST00000513128 SLC39A5Q6ZMH5 540 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 NCAPG2Q86XI2 1143 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 CLASRPQ8N2M8 674 aaKnown RBP7.07□□□□□ -1.28
GYPB-213ENST00000513128 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 PIK3R5Q8WYR1 880 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 FERMT2Q96AC1 680 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 THAP11Q96EK4 314 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 KIF1BPQ96EK5 621 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 MAML3Q96JK9 1138 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 VCPKMTQ9H867 229 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 RNF19AQ9NV58 838 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 PAG1Q9NWQ8 432 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 ADAMTS5Q9UNA0 930 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 DOLKQ9UPQ8 538 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 ATP11BQ9Y2G3 1177 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 PCDHGA11Q9Y5H2 935 aa7.07□□□□□ -1.28
GYPB-213ENST00000513128 MYH4Q9Y623 1939 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 TRIM43BA6NCK2 446 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 SEPT4O43236 478 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 STRNO43815 780 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 MSCO60682 206 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 ATP5JP18859 108 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 EPHB4P54760 987 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 ICA1Q05084 483 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 SNX17Q15036 470 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 LRRC41Q15345 812 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 HSP90AB4PQ58FF6 505 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 C20orf194Q5TEA3 1177 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 DMRTA1Q5VZB9 504 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 CTR9Q6PD62 1173 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 DPH6Q7L8W6 267 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 RPAP2Q8IXW5 612 aaPredicted RBP7.06□□□□□ -1.28
GYPB-213ENST00000513128 ARRDC4Q8NCT1 418 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 REPS2Q8NFH8 660 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 BADQ92934 168 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 TRIM43Q96BQ3 446 aaPredicted RBP7.06□□□□□ -1.28
GYPB-213ENST00000513128 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
GYPB-213ENST00000513128 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
GYPB-213ENST00000513128 HAUS7Q99871 368 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 LBHD1Q9BQE6 289 aaPredicted RBP7.06□□□□□ -1.28
GYPB-213ENST00000513128 PUS7LQ9H0K6 701 aaKnown RBP7.06□□□□□ -1.28
GYPB-213ENST00000513128 MROH8Q9H579 483 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 PRDM5Q9NQX1 630 aaPredicted RBP7.06□□□□□ -1.28
GYPB-213ENST00000513128 SWAP70Q9UH65 585 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 MCM3APO60318 1980 aa7.06□□□□□ -1.28
GYPB-213ENST00000513128 ZBED9Q6R2W3 1325 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 UNC80Q8N2C7 3258 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 VWA5AO00534 786 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 SCAMP3O14828 347 aaKnown RBP7.05□□□□□ -1.28
GYPB-213ENST00000513128 WDR46O15213 610 aaKnown RBP7.05□□□□□ -1.28
GYPB-213ENST00000513128 PGK1P00558 417 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 FCER1AP12319 257 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 WEE1P30291 646 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 NAA30Q147X3 362 aaPredicted RBP7.05□□□□□ -1.28
GYPB-213ENST00000513128 ZNF792Q3KQV3 632 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 FAM83BQ5T0W9 1011 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 C16orf86Q6ZW13 317 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 TMC7Q7Z402 723 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 ABRAQ8N0Z2 381 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 STK11IPQ8N1F8 1099 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 MB21D1Q8N884 522 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 HINFPQ9BQA5 517 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 ARHGAP9Q9BRR9 750 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 COL25A1Q9BXS0 654 aaPredicted RBP7.05□□□□□ -1.28
GYPB-213ENST00000513128 ARHGEF10LQ9HCE6 1279 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 PDLIM7Q9NR12 457 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 ATP8A2Q9NTI2 1148 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 ZNF214Q9UL59 606 aaPredicted RBP7.05□□□□□ -1.28
GYPB-213ENST00000513128 RIPK3Q9Y572 518 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 SLC4A4Q9Y6R1 1079 aa7.05□□□□□ -1.28
GYPB-213ENST00000513128 EYSQ5T1H1 3165 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 LAMA2P24043 3122 aaKnown RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 CDH23Q9H251 3354 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 KBTBD13C9JR72 458 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 ADCY6O43306 1168 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 RAB11FIP3O75154 756 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 HMMRO75330 724 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 ZNF865P0CJ78 1059 aaPredicted RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 HOXB1P14653 301 aaPredicted RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 STAT3P40763 770 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 TLE2Q04725 743 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 UBE3CQ15386 1083 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 TSHZ3Q63HK5 1081 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 FAM109BQ6ICB4 259 aaPredicted RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 RIOX2Q8IUF8 465 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 TSEN2Q8NCE0 465 aaKnown RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 ZNF592Q92610 1267 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 GPKOWQ92917 476 aaPredicted RBP eCLIP7.04□□□□□ -1.28
GYPB-213ENST00000513128 CCDC17Q96LX7 622 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 STRBPQ96SI9 672 aaKnown RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 MMP19Q99542 508 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 CDX2Q99626 313 aaPredicted RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 TINF2Q9BSI4 451 aa7.04□□□□□ -1.28
GYPB-213ENST00000513128 TTYH1Q9H313 450 aaPredicted RBP7.04□□□□□ -1.28
GYPB-213ENST00000513128 KANSL2Q9H9L4 492 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms