RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 GPHNQ9NQX3 736 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-216ENST00000512683 PDGFCQ9NRA1 345 aa14.79□□□□□ -0.04
VEGFA-216ENST00000512683 TTC28Q96AY4 2481 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 RAD50Q92878 1312 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 NMT2O60551 498 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 SNHG28P0DPA3 235 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 HSPD1P10809 573 aaKnown RBP14.78□□□□□ -0.04
VEGFA-216ENST00000512683 ALDH5A1P51649 535 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-216ENST00000512683 PTPN11Q06124 597 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-216ENST00000512683 TJAP1Q5JTD0 557 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 MFSD6Q6ZSS7 791 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 DGKHQ86XP1 1220 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 NOC4LQ9BVI4 516 aaKnown RBP14.78□□□□□ -0.04
VEGFA-216ENST00000512683 LNPKQ9C0E8 428 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 ALDH8A1Q9H2A2 487 aaPredicted RBP14.78□□□□□ -0.04
VEGFA-216ENST00000512683 SLC28A3Q9HAS3 691 aa14.78□□□□□ -0.04
VEGFA-216ENST00000512683 ACRP10323 421 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 PDHBP11177 359 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 EDNRBP24530 442 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 RFC2P35250 354 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 TTBK2Q6IQ55 1244 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 RNF207Q6ZRF8 634 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 EEPD1Q7L9B9 569 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 FBXO16Q8IX29 292 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-216ENST00000512683 SCFD2Q8WU76 684 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 MTG1Q9BT17 334 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-216ENST00000512683 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.05
VEGFA-216ENST00000512683 TOMM22Q9NS69 142 aa14.77□□□□□ -0.05
VEGFA-216ENST00000512683 LAMA2P24043 3122 aaKnown RBP14.76□□□□□ -0.05
VEGFA-216ENST00000512683 PTPDC1A2A3K4 754 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 A6NJR5 290 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 B4GALT4O60513 344 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 SLC16A2P36021 539 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 SNAP25P60880 206 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 ZNF543Q08ER8 600 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 NFRKBQ6P4R8 1299 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 PHOSPHO2Q8TCD6 241 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 CLEC4DQ8WXI8 215 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 ANKS1AQ92625 1134 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 ESR2Q92731 530 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 TRPV6Q9H1D0 765 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 SLC4A7Q9Y6M7 1214 aa14.76□□□□□ -0.05
VEGFA-216ENST00000512683 UNC80Q8N2C7 3258 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 PBX2P40425 430 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 RPS6P62753 249 aaKnown RBP14.75□□□□□ -0.05
VEGFA-216ENST00000512683 PURAQ00577 322 aaKnown RBP14.75□□□□□ -0.05
VEGFA-216ENST00000512683 PDE4DQ08499 809 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 RRP12Q5JTH9 1297 aaKnown RBP14.75□□□□□ -0.05
VEGFA-216ENST00000512683 B4GALNT3Q6L9W6 998 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 FAM227BQ96M60 508 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 PRDM6Q9NQX0 595 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 PCDHA11Q9Y5I1 949 aa14.75□□□□□ -0.05
VEGFA-216ENST00000512683 CCDC171Q6TFL3 1326 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 GRXCR1A8MXD5 290 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 NFIBO00712 420 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 ZNF213O14771 459 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 ACTN1P12814 892 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 CCL23P55773 120 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 NUCB1Q02818 461 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 TTLL4Q14679 1199 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 OTOP2Q7RTS6 562 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 CHD1LQ86WJ1 897 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 IQCA1Q86XH1 822 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 PLEKHM2Q8IWE5 1019 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 OR6J1Q8NGC5 347 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-216ENST00000512683 OSBPL3Q9H4L5 887 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 CXXC1Q9P0U4 656 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-216ENST00000512683 MTMR7Q9Y216 660 aa14.74□□□□□ -0.05
VEGFA-216ENST00000512683 SUPT16HQ9Y5B9 1047 aaKnown RBP14.74□□□□□ -0.05
VEGFA-216ENST00000512683 TNKSO95271 1327 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 HIP1O00291 1037 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 PARNO95453 639 aaKnown RBP14.73□□□□□ -0.05
VEGFA-216ENST00000512683 POU3F3P20264 500 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-216ENST00000512683 CALML3P27482 149 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 PSMC6P62333 389 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 MCF2L2Q86YR7 1114 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 RETREG2Q8NC44 543 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 CHMP4CQ96CF2 233 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 IWS1Q96ST2 819 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 WNT8AQ9H1J5 351 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 PRDM12Q9H4Q4 367 aa14.73□□□□□ -0.05
VEGFA-216ENST00000512683 FRMPD2Q68DX3 1309 aaPredicted RBP14.72□□□□□ -0.05
VEGFA-216ENST00000512683 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
VEGFA-216ENST00000512683 MYL3P08590 195 aa14.72□□□□□ -0.05
VEGFA-216ENST00000512683 ATP2A2P16615 1042 aaKnown RBP14.72□□□□□ -0.05
VEGFA-216ENST00000512683 SDSP20132 328 aa14.72□□□□□ -0.05
VEGFA-216ENST00000512683 MRPS5P82675 430 aaKnown RBP14.72□□□□□ -0.05
VEGFA-216ENST00000512683 NMIQ13287 307 aaPredicted RBP14.72□□□□□ -0.05
VEGFA-216ENST00000512683 BFSP2Q13515 415 aa14.72□□□□□ -0.05
VEGFA-216ENST00000512683 NBPF20Q3BBV1 942 aa14.72□□□□□ -0.05
VEGFA-216ENST00000512683 SAMD3Q8N6K7 520 aa14.72□□□□□ -0.05
VEGFA-216ENST00000512683 NSUN6Q8TEA1 469 aaKnown RBP14.72□□□□□ -0.05
VEGFA-216ENST00000512683 PURBQ96QR8 312 aaKnown RBP14.72□□□□□ -0.05
VEGFA-216ENST00000512683 MAP3K20Q9NYL2 800 aaKnown RBP14.72□□□□□ -0.05
VEGFA-216ENST00000512683 CTNNA3Q9UI47 895 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms