RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 CYP39A1Q9NYL5 469 aa14.95□□□□□ -0.02
DDX41-215ENST00000512431 ADD3Q9UEY8 706 aaKnown RBP14.95□□□□□ -0.02
DDX41-215ENST00000512431 RAD50Q92878 1312 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 TRANK1O15050 2925 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 GSG1L2A8MUP6 293 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 KPNA6O60684 536 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 PRDM1O75626 825 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 TSPY3P0CV98 308 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 TSPY8P0CW00 308 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 ALADP13716 330 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 SSTR3P32745 418 aaPredicted RBP14.94□□□□□ -0.02
DDX41-215ENST00000512431 SLC1A4P43007 532 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 TDO2P48775 406 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 PURAQ00577 322 aaKnown RBP14.94□□□□□ -0.02
DDX41-215ENST00000512431 TMEM63BQ5T3F8 832 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 NSMFQ6X4W1 530 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 GJD3Q8N144 294 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 OR6J1Q8NGC5 347 aa14.94□□□□□ -0.02
DDX41-215ENST00000512431 ZNF536O15090 1300 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 PRRC2BQ5JSZ5 2229 aaKnown RBP14.93□□□□□ -0.02
DDX41-215ENST00000512431 ARHGEF15O94989 841 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 APPP05067 770 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 PTPN11Q06124 597 aaPredicted RBP14.93□□□□□ -0.02
DDX41-215ENST00000512431 NBPF20Q3BBV1 942 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 PPP4R3BQ5MIZ7 849 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 NFRKBQ6P4R8 1299 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 CCDC155Q8N6L0 562 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 GMCL1Q96IK5 515 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 CD320Q9NPF0 282 aa14.93□□□□□ -0.02
DDX41-215ENST00000512431 DDX49Q9Y6V7 483 aaKnown RBP14.93□□□□□ -0.02
DDX41-215ENST00000512431 GREB1LQ9C091 1923 aaPredicted RBP14.92□□□□□ -0.02
DDX41-215ENST00000512431 LPXNO60711 386 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 SLC3A2P08195 630 aaKnown RBP14.92□□□□□ -0.02
DDX41-215ENST00000512431 GNAT2P19087 354 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 MCCP23508 829 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 MRE11P49959 708 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 PDE4BQ07343 736 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 LRRFIP1Q32MZ4 808 aaKnown RBP14.92□□□□□ -0.02
DDX41-215ENST00000512431 MUM1L1Q5H9M0 696 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 NEDD1Q8NHV4 660 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 GDPD5Q8WTR4 605 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 CHMP4CQ96CF2 233 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 CRBNQ96SW2 442 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 MPHOSPH6Q99547 160 aaKnown RBP14.92□□□□□ -0.02
DDX41-215ENST00000512431 UBE2ZQ9H832 354 aaPredicted RBP14.92□□□□□ -0.02
DDX41-215ENST00000512431 CCPG1Q9ULG6 757 aa14.92□□□□□ -0.02
DDX41-215ENST00000512431 LOC102724159A0A0B4J2E5 919 aa14.91□□□□□ -0.02
DDX41-215ENST00000512431 NKRFO15226 690 aaKnown RBP eCLIP14.91□□□□□ -0.02
DDX41-215ENST00000512431 PLA2G6O60733 806 aa14.91□□□□□ -0.02
DDX41-215ENST00000512431 CHMP4BP1P59074 171 aa14.91□□□□□ -0.02
DDX41-215ENST00000512431 TFAP4Q01664 338 aa14.91□□□□□ -0.02
DDX41-215ENST00000512431 PWP2Q15269 919 aaKnown RBP14.91□□□□□ -0.02
DDX41-215ENST00000512431 LEXMQ3ZCV2 418 aa14.91□□□□□ -0.02
DDX41-215ENST00000512431 FAM178BQ8IXR5 827 aa14.91□□□□□ -0.02
DDX41-215ENST00000512431 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.9□□□□□ -0.02
DDX41-215ENST00000512431 PARNO95453 639 aaKnown RBP14.9□□□□□ -0.02
DDX41-215ENST00000512431 KCNA5P22460 613 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 ALDH5A1P51649 535 aaPredicted RBP14.9□□□□□ -0.02
DDX41-215ENST00000512431 SNAP25P60880 206 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 WDR5P61964 334 aaKnown RBP14.9□□□□□ -0.02
DDX41-215ENST00000512431 PUS10Q3MIT2 529 aaKnown RBP14.9□□□□□ -0.02
DDX41-215ENST00000512431 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 AFAP1L1Q8TED9 768 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 APPBP2Q92624 585 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 TGS1Q96RS0 853 aaKnown RBP14.9□□□□□ -0.02
DDX41-215ENST00000512431 RAD9AQ99638 391 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 NACAP1Q9BZK3 213 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 KCNH6Q9H252 994 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 MTUS1Q9ULD2 1270 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 PRR12Q9ULL5 1215 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 MYH4Q9Y623 1939 aa14.9□□□□□ -0.02
DDX41-215ENST00000512431 RBM47A0AV96 593 aaKnown RBP14.89□□□□□ -0.03
DDX41-215ENST00000512431 LCHNA4D1U4 455 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
DDX41-215ENST00000512431 MS4A1P11836 297 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 PDE4DQ08499 809 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 BAATQ14032 418 aaPredicted RBP14.89□□□□□ -0.03
DDX41-215ENST00000512431 PPP2R5BQ15173 497 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 PTGISQ16647 500 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 PTCRAQ6ISU1 281 aaPredicted RBP14.89□□□□□ -0.03
DDX41-215ENST00000512431 KCTD1Q719H9 257 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 SPRED2Q7Z698 418 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 CAGE1Q8TC20 777 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 PURBQ96QR8 312 aaKnown RBP14.89□□□□□ -0.03
DDX41-215ENST00000512431 SUGCTQ9HAC7 445 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 STX8Q9UNK0 236 aa14.89□□□□□ -0.03
DDX41-215ENST00000512431 PTPDC1A2A3K4 754 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 A6NJR5 290 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 B4DLN1 442 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 GPAA1O43292 621 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 ICAM1P05362 532 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 ZFYP08048 801 aaPredicted RBP14.88□□□□□ -0.03
DDX41-215ENST00000512431 MRPL12P52815 198 aaKnown RBP14.88□□□□□ -0.03
DDX41-215ENST00000512431 ERVK-21P61565 698 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 CNKSR3Q6P9H4 555 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.88□□□□□ -0.03
DDX41-215ENST00000512431 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 SCFD2Q8WU76 684 aa14.88□□□□□ -0.03
DDX41-215ENST00000512431 PPP1R13LQ8WUF5 828 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms