RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 CDX2Q99626 313 aaPredicted RBP17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 SEZ6LQ9BYH1 1024 aa17.27■□□□□ 0.36
CCHCR1-229ENST00000512418 CD4P01730 458 aa17.26■□□□□ 0.35
CCHCR1-229ENST00000512418 PTGS1P23219 599 aa17.26■□□□□ 0.35
CCHCR1-229ENST00000512418 SLC30A10Q6XR72 485 aa17.26■□□□□ 0.35
CCHCR1-229ENST00000512418 RNF207Q6ZRF8 634 aa17.26■□□□□ 0.35
CCHCR1-229ENST00000512418 IQCA1Q86XH1 822 aa17.26■□□□□ 0.35
CCHCR1-229ENST00000512418 CLEC4DQ8WXI8 215 aa17.26■□□□□ 0.35
CCHCR1-229ENST00000512418 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.26■□□□□ 0.356e-7■■■□□ 16.7
CCHCR1-229ENST00000512418 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
CCHCR1-229ENST00000512418 CSF2RAP15509 400 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 CALML3P27482 149 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 DUSP28Q4G0W2 176 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 CCDC178Q5BJE1 867 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 MPHOSPH6Q99547 160 aaKnown RBP17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 ZKSCAN3Q9BRR0 538 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 DSCC1Q9BVC3 393 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
CCHCR1-229ENST00000512418 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 KDM4AO75164 1064 aa17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 RPS6P62753 249 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 TMEM63BQ5T3F8 832 aa17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 PSRC1Q6PGN9 363 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 PNMA1Q8ND90 353 aa17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
CCHCR1-229ENST00000512418 GRIN2DO15399 1336 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 RBM47A0AV96 593 aaKnown RBP17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 GOLGA8HP0CJ92 632 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 DNAJB2P25686 324 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 IMMTQ16891 758 aaKnown RBP17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 TMEM240Q5SV17 173 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 C16orf59Q7L2K0 433 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 DNERQ8NFT8 737 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 HIPK3Q9H422 1215 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
CCHCR1-229ENST00000512418 B4DLN1 442 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 B4E1Z4 1266 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 EDNRBP24530 442 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 CYP2C18P33260 490 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 CPT1AP50416 773 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 PDE4DQ08499 809 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 RASIP1Q5U651 963 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 MYLIPQ8WY64 445 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 ANKS1AQ92625 1134 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 ZSCAN10Q96SZ4 725 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 UBA5Q9GZZ9 404 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 MAF1Q9H063 256 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
CCHCR1-229ENST00000512418 RAD50Q92878 1312 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 B4GALT4O60513 344 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 FOSL2P15408 326 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 PSMC6P62333 389 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 PPP2R5BQ15173 497 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 CDC37Q16543 378 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 USH1GQ495M9 461 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 ASPRV1Q53RT3 343 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 ZNF365Q70YC5 407 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 ENAHQ8N8S7 591 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 MAFAQ8NHW3 353 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 KRT23Q9C075 422 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 CPVLQ9H3G5 476 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 CNNM2Q9H8M5 875 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 IL23AQ9NPF7 189 aa17.21■□□□□ 0.35
CCHCR1-229ENST00000512418 TNKSO95271 1327 aa17.21■□□□□ 0.34
CCHCR1-229ENST00000512418 ABCB11O95342 1321 aa17.21■□□□□ 0.34
CCHCR1-229ENST00000512418 ACRP10323 421 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 PURAQ00577 322 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 BRDTQ58F21 947 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 OR6J1Q8NGC5 347 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 SCFD2Q8WU76 684 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 TIFAQ96CG3 184 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 NOC4LQ9BVI4 516 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 TRPV6Q9H1D0 765 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 MTIF3Q9H2K0 278 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 ZSWIM5Q9P217 1185 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 PRUNE2Q8WUY3 3088 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 CUL9Q8IWT3 2517 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 UMODL1Q5DID0 1318 aa17.2■□□□□ 0.34
CCHCR1-229ENST00000512418 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
CCHCR1-229ENST00000512418 UBAC1Q9BSL1 405 aa17.19■□□□□ 0.34
CCHCR1-229ENST00000512418 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
CCHCR1-229ENST00000512418 PARP1P09874 1014 aaKnown RBP17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 SUPT20HL2P0C7V6 817 aa17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 HERVK_113Q902F9 699 aa17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 MTG1Q9BT17 334 aaPredicted RBP17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 PBX4Q9BYU1 374 aa17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 IL25Q9H293 177 aa17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 ZNF576Q9H609 170 aa17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 VCANP13611 3396 aa17.18■□□□□ 0.34
CCHCR1-229ENST00000512418 A6NJR5 290 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 KPNA6O60684 536 aa17.17■□□□□ 0.34
CCHCR1-229ENST00000512418 FGBP02675 491 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms