RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 PNMA6FA0A0J9YX94 578 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 KBTBD13C9JR72 458 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 PLEKHA8P1O95397 391 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 CFBP00751 764 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 CASTP20810 708 aaKnown RBP18.44■□□□□ 0.54
DDX41-214ENST00000512334 TRAF1Q13077 416 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 APOA5Q6Q788 366 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 CMTR1Q8N1G2 835 aaKnown RBP18.44■□□□□ 0.54
DDX41-214ENST00000512334 FANCBQ8NB91 859 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 RGS22Q8NE09 1264 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 TBC1D5Q92609 795 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 RRP36Q96EU6 259 aaKnown RBP18.44■□□□□ 0.54
DDX41-214ENST00000512334 MPHOSPH6Q99547 160 aaKnown RBP18.44■□□□□ 0.54
DDX41-214ENST00000512334 SPZ1Q9BXG8 430 aa18.44■□□□□ 0.54
DDX41-214ENST00000512334 SEC63Q9UGP8 760 aaKnown RBP18.44■□□□□ 0.54
DDX41-214ENST00000512334 PDE4DIPQ5VU43 2346 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 KLF18A0A0U1RQI7 1052 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 DNM1LO00429 736 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 ZBTB43O43298 467 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 CCDC144BQ3MJ40 725 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 Q6ZUG5 572 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 NOL8Q76FK4 1167 aaKnown RBP18.43■□□□□ 0.54
DDX41-214ENST00000512334 FBXO16Q8IX29 292 aaPredicted RBP18.43■□□□□ 0.54
DDX41-214ENST00000512334 CCDC82Q8N4S0 544 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 SRBD1Q8N5C6 995 aaKnown RBP18.43■□□□□ 0.54
DDX41-214ENST00000512334 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
DDX41-214ENST00000512334 GOLGA8AA7E2F4 631 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 GOLGA8BA8MQT2 603 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 PGK1P00558 417 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 RPS6KB1P23443 525 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 SMARCA1P28370 1054 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 LRRC41Q15345 812 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 RTN1Q16799 776 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 DNERQ8NFT8 737 aa18.42■□□□□ 0.54
DDX41-214ENST00000512334 SENP6Q9GZR1 1112 aaPredicted RBP18.42■□□□□ 0.54
DDX41-214ENST00000512334 B4DLN1 442 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 EVI5O60447 810 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 MRPL12P52815 198 aaKnown RBP18.41■□□□□ 0.54
DDX41-214ENST00000512334 PDE4DQ08499 809 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 APOBRQ0VD83 1088 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 TMTC3Q6ZXV5 915 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 RNF180Q86T96 592 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 SYTL5Q8TDW5 730 aaPredicted RBP18.41■□□□□ 0.54
DDX41-214ENST00000512334 BRF1Q92994 677 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 MAF1Q9H063 256 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 KATNBL1Q9H079 304 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 VTA1Q9NP79 307 aa18.41■□□□□ 0.54
DDX41-214ENST00000512334 RBM28Q9NW13 759 aaKnown RBP18.41■□□□□ 0.54
DDX41-214ENST00000512334 LRRC37A2A6NM11 1700 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 LOC102724159A0A0B4J2E5 919 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 DUSP11O75319 330 aaKnown RBP18.4■□□□□ 0.54
DDX41-214ENST00000512334 COL6A1P12109 1028 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 ADCYAP1R1P41586 468 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 TNFAIP2Q03169 654 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 PWP2Q15269 919 aaKnown RBP18.4■□□□□ 0.54
DDX41-214ENST00000512334 PRPF38BQ5VTL8 546 aaKnown RBP18.4■□□□□ 0.54
DDX41-214ENST00000512334 MORC4Q8TE76 937 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 TAAR1Q96RJ0 339 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 PDGFCQ9NRA1 345 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 COL20A1Q9P218 1284 aa18.4■□□□□ 0.54
DDX41-214ENST00000512334 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.39■□□□□ 0.53
DDX41-214ENST00000512334 hCG_1642624A0A1W2PR95 340 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 OPLAHO14841 1288 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 ADCY6O43306 1168 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
DDX41-214ENST00000512334 HOXA13P31271 388 aaPredicted RBP18.39■□□□□ 0.53
DDX41-214ENST00000512334 METAP2P50579 478 aaKnown RBP eCLIP18.39■□□□□ 0.53
DDX41-214ENST00000512334 HSD17B4P51659 736 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 ARHGEF16Q5VV41 709 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 RUFY3Q7L099 469 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 NSUN6Q8TEA1 469 aaKnown RBP18.39■□□□□ 0.53
DDX41-214ENST00000512334 RMDN3Q96TC7 470 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 SPC25Q9HBM1 224 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 NR2E3Q9Y5X4 410 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 CYP46A1Q9Y6A2 500 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 SYNRGQ9UMZ2 1314 aa18.39■□□□□ 0.53
DDX41-214ENST00000512334 GCOM1H8Y6P7 765 aaPredicted RBP18.38■□□□□ 0.53
DDX41-214ENST00000512334 ADAMTS4O75173 837 aa18.38■□□□□ 0.53
DDX41-214ENST00000512334 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
DDX41-214ENST00000512334 POLR2MP0CAP2 368 aa18.38■□□□□ 0.53
DDX41-214ENST00000512334 EIF2AK2P19525 551 aaKnown RBP18.38■□□□□ 0.53
DDX41-214ENST00000512334 ATN1P54259 1190 aaPredicted RBP18.38■□□□□ 0.53
DDX41-214ENST00000512334 TAPT1Q6NXT6 567 aa18.38■□□□□ 0.53
DDX41-214ENST00000512334 C7orf61Q8IZ16 206 aa18.38■□□□□ 0.53
DDX41-214ENST00000512334 FERMT2Q96AC1 680 aa18.38■□□□□ 0.53
DDX41-214ENST00000512334 UPF3BQ9BZI7 483 aaKnown RBP18.38■□□□□ 0.53
DDX41-214ENST00000512334 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
DDX41-214ENST00000512334 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
DDX41-214ENST00000512334 SMPD1P17405 629 aa18.37■□□□□ 0.53
DDX41-214ENST00000512334 EDNRBP24530 442 aa18.37■□□□□ 0.53
DDX41-214ENST00000512334 RCAN1P53805 252 aa18.37■□□□□ 0.53
DDX41-214ENST00000512334 IQSEC1Q6DN90 963 aa18.37■□□□□ 0.53
DDX41-214ENST00000512334 FCHSD1Q86WN1 690 aa18.37■□□□□ 0.53
DDX41-214ENST00000512334 SAMD3Q8N6K7 520 aa18.37■□□□□ 0.53
DDX41-214ENST00000512334 ALPK3Q96L96 1907 aa18.37■□□□□ 0.53
DDX41-214ENST00000512334 CCDC196A0A1B0GTZ2 297 aa18.36■□□□□ 0.53
DDX41-214ENST00000512334 MYADML2A6NDP7 307 aa18.36■□□□□ 0.53
DDX41-214ENST00000512334 GHRHRQ02643 423 aa18.36■□□□□ 0.53
DDX41-214ENST00000512334 LRRC26Q2I0M4 334 aa18.36■□□□□ 0.53
DDX41-214ENST00000512334 HEATR3Q7Z4Q2 680 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms