RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SWAP70Q9UH65 585 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 NOB1Q9ULX3 412 aaKnown RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 GVINP1Q7Z2Y8 2422 aa11.02□□□□□ -0.64
NUP54-211ENST00000512151 EPG5Q9HCE0 2579 aa11.02□□□□□ -0.65
NUP54-211ENST00000512151 CDK8P49336 464 aa11.02□□□□□ -0.65
NUP54-211ENST00000512151 DLX2Q07687 328 aaPredicted RBP11.02□□□□□ -0.65
NUP54-211ENST00000512151 SMAD2Q15796 467 aaKnown RBP11.02□□□□□ -0.65
NUP54-211ENST00000512151 LCORLQ8N3X6 602 aa11.02□□□□□ -0.65
NUP54-211ENST00000512151 ATOH1Q92858 354 aaPredicted RBP11.02□□□□□ -0.65
NUP54-211ENST00000512151 CTAGE1Q96RT6 745 aa11.02□□□□□ -0.65
NUP54-211ENST00000512151 PRRX2Q99811 253 aa11.02□□□□□ -0.65
NUP54-211ENST00000512151 CRNKL1Q9BZJ0 848 aaKnown RBP11.02□□□□□ -0.65
NUP54-211ENST00000512151 HOMER2Q9NSB8 354 aa11.02□□□□□ -0.65
NUP54-211ENST00000512151 Q9Y3F1 56 aa11.02□□□□□ -0.65
NUP54-211ENST00000512151 DCHS1Q96JQ0 3298 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 ATG2AQ2TAZ0 1938 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 BAZ2AQ9UIF9 1905 aaKnown RBP11.01□□□□□ -0.65
NUP54-211ENST00000512151 PRKAB2O43741 272 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 MYL3P08590 195 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 ALDH1L2Q3SY69 923 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 FAM47CQ5HY64 1035 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 IQSEC1Q6DN90 963 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 BANK1Q8NDB2 785 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 CHST13Q8NET6 341 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 SPDYE1Q8NFV5 336 aaPredicted RBP11.01□□□□□ -0.65
NUP54-211ENST00000512151 CCDC8Q9H0W5 538 aaPredicted RBP11.01□□□□□ -0.65
NUP54-211ENST00000512151 KANSL2Q9H9L4 492 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 SLC38A10Q9HBR0 1119 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 A1CFQ9NQ94 594 aaKnown RBP11.01□□□□□ -0.65
NUP54-211ENST00000512151 CLDND1Q9NY35 253 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 LCTP09848 1927 aa11.01□□□□□ -0.65
NUP54-211ENST00000512151 C5orf42Q9H799 3197 aa11□□□□□ -0.65
NUP54-211ENST00000512151 MBTPS2O43462 519 aa11□□□□□ -0.65
NUP54-211ENST00000512151 NBNO60934 754 aa11□□□□□ -0.65
NUP54-211ENST00000512151 ZBED4O75132 1171 aa11□□□□□ -0.65
NUP54-211ENST00000512151 NDUFB10O96000 172 aa11□□□□□ -0.65
NUP54-211ENST00000512151 TIGD5Q53EQ6 642 aa11□□□□□ -0.65
NUP54-211ENST00000512151 RPAINQ86UA6 219 aa11□□□□□ -0.65
NUP54-211ENST00000512151 SUGP1Q8IWZ8 645 aaKnown RBP11□□□□□ -0.65
NUP54-211ENST00000512151 PRPF38AQ8NAV1 312 aaKnown RBP11□□□□□ -0.65
NUP54-211ENST00000512151 DHX38Q92620 1227 aaKnown RBP11□□□□□ -0.65
NUP54-211ENST00000512151 KIFC2Q96AC6 838 aa11□□□□□ -0.65
NUP54-211ENST00000512151 CCDC17Q96LX7 622 aa11□□□□□ -0.65
NUP54-211ENST00000512151 PURBQ96QR8 312 aaKnown RBP11□□□□□ -0.65
NUP54-211ENST00000512151 FBXO40Q9UH90 709 aa11□□□□□ -0.65
NUP54-211ENST00000512151 FAM50BQ9Y247 325 aa11□□□□□ -0.65
NUP54-211ENST00000512151 GREB1LQ9C091 1923 aaPredicted RBP10.99□□□□□ -0.65
NUP54-211ENST00000512151 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 MED19A0JLT2 244 aaPredicted RBP10.99□□□□□ -0.65
NUP54-211ENST00000512151 PRR23AA6NEV1 266 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 ASB14A6NK59 587 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 PROB1E7EW31 1015 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 H0Y858 1186 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 CXCL10P02778 98 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 GNAI3P08754 354 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 PDE6AP16499 860 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 ID4P47928 161 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 ZXDAP98168 799 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 BFSP2Q13515 415 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 C16orf86Q6ZW13 317 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 EAF2Q96CJ1 260 aaPredicted RBP10.99□□□□□ -0.65
NUP54-211ENST00000512151 MTG1Q9BT17 334 aaPredicted RBP10.99□□□□□ -0.65
NUP54-211ENST00000512151 TLR9Q9NR96 1032 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 POLR3EQ9NVU0 708 aa10.99□□□□□ -0.65
NUP54-211ENST00000512151 KMT2BQ9UMN6 2715 aaPredicted RBP10.98□□□□□ -0.65
NUP54-211ENST00000512151 MYO15AQ9UKN7 3530 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 TCRBV5S4A2TA0A5A2 114 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 F5H6K3 240 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 CENPBP07199 599 aaPredicted RBP10.98□□□□□ -0.65
NUP54-211ENST00000512151 ATXN8OSP0DMR3 200 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
NUP54-211ENST00000512151 KLRC3Q07444 240 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 PKN1Q16512 942 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 PTPROQ16827 1216 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 DUSP28Q4G0W2 176 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 EPC2Q52LR7 807 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 C12orf60Q5U649 245 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 NFRKBQ6P4R8 1299 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 CNKSR3Q6P9H4 555 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.98□□□□□ -0.654e-6■□□□□ 8.6
NUP54-211ENST00000512151 KIAA1211Q6ZU35 1233 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 CRBNQ96SW2 442 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 FSD1Q9BTV5 496 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 API5Q9BZZ5 524 aaKnown RBP10.98□□□□□ -0.65
NUP54-211ENST00000512151 ARMT1Q9H993 441 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
NUP54-211ENST00000512151 TPRP12270 2363 aaKnown RBP10.98□□□□□ -0.65
NUP54-211ENST00000512151 STXBP3O00186 592 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 CD44P16070 742 aaKnown RBP10.97□□□□□ -0.65
NUP54-211ENST00000512151 AVPR2P30518 371 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 GTF2F1P35269 517 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUP54-211ENST00000512151 HYAL1Q12794 435 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 GPM6BQ13491 265 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 LRRFIP1Q32MZ4 808 aaKnown RBP10.97□□□□□ -0.65
NUP54-211ENST00000512151 ASIC4Q96FT7 647 aa10.97□□□□□ -0.65
NUP54-211ENST00000512151 POP1Q99575 1024 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms