RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 PLEKHA8P1O95397 391 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 TECP42680 631 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
CPNE4-209ENST00000512055 STXBP4Q6ZWJ1 553 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 CACTINQ8WUQ7 758 aaKnown RBP11.92□□□□□ -0.5
CPNE4-209ENST00000512055 TEKT1Q969V4 418 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 TRIM55Q9BYV6 548 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 GOLPH3LQ9H4A5 285 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 RFX7Q2KHR2 1363 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 KRT9P35527 623 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 CALCOCO2Q13137 446 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 SMYD4Q8IYR2 804 aaPredicted RBP11.92□□□□□ -0.5
CPNE4-209ENST00000512055 GOLGA8FQ08AF8 430 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 GOLGA8DPQ0D2H9 430 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 JRKLQ9Y4A0 524 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 REREQ9P2R6 1566 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 KRT83P78385 493 aa11.92□□□□□ -0.5
CPNE4-209ENST00000512055 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 EXOSC10Q01780 885 aaKnown RBP11.91□□□□□ -0.5
CPNE4-209ENST00000512055 USP17L1Q7RTZ2 530 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 RSPH3Q86UC2 560 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 HVCN1Q96D96 273 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 EIF2AQ9BY44 585 aaKnown RBP11.91□□□□□ -0.5
CPNE4-209ENST00000512055 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 ARHGAP6O43182 974 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 RPS6KA4O75676 772 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 ALDH1B1P30837 517 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 TRAF1Q13077 416 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 JPH2Q9BR39 696 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-209ENST00000512055 DESI2Q9BSY9 194 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 FAM169AQ9Y6X4 670 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 MAN1A2O60476 641 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 FAM13AO94988 1023 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
CPNE4-209ENST00000512055 ZKSCAN8Q15776 578 aaPredicted RBP11.91□□□□□ -0.5
CPNE4-209ENST00000512055 CNNM4Q6P4Q7 775 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 CARD6Q9BX69 1037 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 SYNCQ9H7C4 482 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 THEGQ9P2T0 379 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 NMT2O60551 498 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 TNNC1P63316 161 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 Q9H521 79 aa11.91□□□□□ -0.5
CPNE4-209ENST00000512055 TMEM110-MUSTN1A8MSY1 372 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 CSF1RP07333 972 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 ATP5DP30049 168 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 ANKRD20A3Q5VUR7 823 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 LY9Q9HBG7 655 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 ARHGAP42A6NI28 874 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 SERPINI2O75830 405 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 PMS1P54277 932 aaKnown RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 SNX16P57768 344 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 DCAF17Q5H9S7 520 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 NCAPH2Q6IBW4 605 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 PPANQ9NQ55 473 aaKnown RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 KDM6AO15550 1401 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 EEF2P13639 858 aaKnown RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 PPP1R21Q6ZMI0 780 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 PDZD8Q8NEN9 1154 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 ALDH8A1Q9H2A2 487 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 PRPHP41219 470 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 SP4Q02446 784 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 HERC4Q5GLZ8 1057 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 CCT6BQ92526 530 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 NARFQ9UHQ1 456 aa11.9□□□□□ -0.5
CPNE4-209ENST00000512055 TRPC5Q9UL62 973 aaPredicted RBP11.9□□□□□ -0.5
CPNE4-209ENST00000512055 GOLGA6BA6NDN3 693 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
CPNE4-209ENST00000512055 RASSF2P50749 326 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 TSC22D3Q99576 134 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 PALM3A6NDB9 673 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-209ENST00000512055 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-209ENST00000512055 IRX4P78413 519 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 SEPT12Q8IYM1 358 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 SLF1Q9BQI6 1058 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 ANKFY1Q9P2R3 1169 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 NCOA3Q9Y6Q9 1424 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 ARID5BQ14865 1188 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-209ENST00000512055 STK32BQ9NY57 414 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 CFBP00751 764 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 GRAPQ13588 217 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 CEP70Q8NHQ1 597 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
CPNE4-209ENST00000512055 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
CPNE4-209ENST00000512055 BCL2L12Q9HB09 334 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 PDE6BP35913 854 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 NEK8Q86SG6 692 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 ZNF34Q8IZ26 560 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
CPNE4-209ENST00000512055 SPDL1Q96EA4 605 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms