RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZSCAN23Q3MJ62 389 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 MMEL1Q495T6 779 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 ATL3Q6DD88 541 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 RUFY3Q7L099 469 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PLA2G4DQ86XP0 818 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 KLHL7Q8IXQ5 586 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PDZD8Q8NEN9 1154 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SECISBP2LQ93073 1101 aaKnown RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 PPP2R3CQ969Q6 453 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 ANKRD36BP1Q96IX9 119 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SMYD2Q9NRG4 433 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 LARSQ9P2J5 1176 aaKnown RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 ARPP21Q9UBL0 812 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 POLR2DO15514 142 aaKnown RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 GNA14O95837 355 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PDE6CP51160 858 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 COG7P83436 770 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 CTDSPL2Q05D32 466 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SLC12A1Q13621 1099 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 POLA2Q14181 598 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 FAM47AQ5JRC9 791 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 GPBP1Q86WP2 473 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SSH3Q8TE77 659 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PRIMPOLQ96LW4 560 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 EFCC1Q9HA90 598 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SLC52A2Q9HAB3 445 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SEPT9Q9UHD8 586 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 NPHP4O75161 1426 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 PPLO60437 1756 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PIK3C2BO00750 1634 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 CLRN2A0PK11 232 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 H7C0C1 242 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 A1BGP04217 495 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 ATP5OP48047 213 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 PDE1CQ14123 709 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 PTK2BQ14289 1009 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 RUFY4Q6ZNE9 571 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 RAPH1Q70E73 1250 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 DNAJC10Q8IXB1 793 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 NLRP7Q8WX94 980 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 ZNF594Q96JF6 807 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 OSBPL3Q9H4L5 887 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 IFT122Q9HBG6 1241 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 SUCLA2Q9P2R7 463 aaPredicted RBP6.32□□□□□ -1.4
USP38-203ENST00000511739 KCNH3Q9ULD8 1083 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 MAD1L1Q9Y6D9 718 aa6.32□□□□□ -1.4
USP38-203ENST00000511739 USP19O94966 1318 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 SYNRGQ9UMZ2 1314 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 FAM170AA1A519 330 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 TROVE2P10155 538 aaKnown RBP eCLIP6.31□□□□□ -1.4
USP38-203ENST00000511739 XRCC5P13010 732 aaKnown RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 PIK3CAP42336 1068 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 AK2P54819 239 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 FAM178BQ8IXR5 827 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 LRRC43Q8N309 656 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 ALKBH8Q96BT7 664 aaKnown RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 ADGRB1O14514 1584 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 OCM2P0CE71 109 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 OCMP0CE72 109 aaPredicted RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 ABCB5Q2M3G0 1257 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 GPIHBP1Q8IV16 184 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 SLFN12Q8IYM2 578 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 CDC26Q8NHZ8 85 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 U2AF1L4Q8WU68 220 aaKnown RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 SLC7A3Q8WY07 619 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 NAPGQ99747 312 aaPredicted RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 SLC38A10Q9HBR0 1119 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 LRRC4Q9HBW1 653 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 PNMA3Q9UL41 463 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 PREX1Q8TCU6 1659 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 NCAPD2Q15021 1401 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 CLTCQ00610 1675 aaKnown RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 ARHGAP42A6NI28 874 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 TTC4O95801 387 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 IFNA8P32881 189 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 NNMTP40261 264 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 AOC3Q16853 763 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 LONRF2Q1L5Z9 754 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 CCDC84Q86UT8 332 aaPredicted RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 BANK1Q8NDB2 785 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 SEPT8Q92599 483 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 CCDC127Q96BQ5 260 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 AMFRQ9UKV5 643 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 PCDHA1Q9Y5I3 950 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 USP32Q8NFA0 1604 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 TMEM232C9JQI7 657 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 PPARGP37231 505 aaPredicted RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 TSNAXIP1Q2TAA8 658 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 TNNI3KQ59H18 835 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 HP1BP3Q5SSJ5 553 aaPredicted RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 ANO1Q5XXA6 986 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 SYT10Q6XYQ8 523 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 YAF2Q8IY57 180 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 IL17REQ8NFR9 667 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 GRK7Q8WTQ7 553 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 LBHD1Q9BQE6 289 aaPredicted RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 MTIF3Q9H2K0 278 aaKnown RBP6.31□□□□□ -1.4
USP38-203ENST00000511739 PCDHA12Q9UN75 941 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms