RNA–Protein interactions for RNA: ENST00000511425.5

IFT122-222, Transcript of intraflagellar transport 122, human

TSL 2

Gene IFT122, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-222	ENST00000511425	SCN7A	Q01118	1682 aa		15.18	■□□□□ 0.02
IFT122-222	ENST00000511425		A0A087WUV0	522 aa	Predicted RBP	15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	CCDC194	A0A1B0GVG4	234 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	GOLGA6C	A6NDK9	693 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	COBL	O75128	1261 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	GOLGA6D	P0CG33	693 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	TCP1	P17987	556 aa	Known RBP	15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	SBK1	Q52WX2	424 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	NAALADL2	Q58DX5	795 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	ALS2CL	Q60I27	953 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	ARHGAP27	Q6ZUM4	889 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	P2RX5	Q93086	422 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	GOLGA6A	Q9NYA3	693 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	TRIM49B	A6NDI0	452 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	VGLL3	A8MV65	326 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425		B4DLN1	442 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	EPB41	P11171	864 aa	Known RBP	15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	GGCX	P38435	758 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	AMPD3	Q01432	767 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	EMB	Q6PCB8	327 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	TPTE2	Q6XPS3	522 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	CCDC42	Q96M95	316 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	ALS2CR12	Q96Q35	445 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	CRNKL1	Q9BZJ0	848 aa	Known RBP	15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	JADE2	Q9NQC1	790 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	SRP68	Q9UHB9	627 aa	Known RBP	15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	CCNL1	Q9UK58	526 aa	Predicted RBP	15.17	■□□□□ 0.02
IFT122-222	ENST00000511425	MAPK8IP1	Q9UQF2	711 aa		15.17	■□□□□ 0.02
IFT122-222	ENST00000511425		A0A1B0GUL6	1792 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	DYNLL1	P63167	89 aa	Known RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	ORC2	Q13416	577 aa	Predicted RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	NNT	Q13423	1086 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	GLE1	Q53GS7	698 aa	Known RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	NBPF5P	Q86XG9	351 aa	Predicted RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	PROM2	Q8N271	834 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	NSUN4	Q96CB9	384 aa	Known RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	CAPZA3	Q96KX2	299 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	DUSP9	Q99956	384 aa	Known RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	TSKS	Q9UJT2	592 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	TAF1L	Q8IZX4	1826 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	TNS1	Q9HBL0	1735 aa	Known RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425		M0R2N6	131 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	ZPR1	O75312	459 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	LCA5L	O95447	670 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	FGFR1OP	O95684	399 aa	Known RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	TM4SF1	P30408	202 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	HIBADH	P31937	336 aa	Known RBP	15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	EPHB4	P54760	987 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	DGKH	Q86XP1	1220 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	ANKS1A	Q92625	1134 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	SH3GL2	Q99962	352 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	C7orf25	Q9BPX7	421 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	TCP11L1	Q9NUJ3	509 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	RNF14	Q9UBS8	474 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	PLAGL2	Q9UPG8	496 aa		15.16	■□□□□ 0.02
IFT122-222	ENST00000511425	USP17L12	C9JPN9	530 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	USP17L21	D6R901	530 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	SRGAP2	O75044	1071 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	APBA3	O96018	575 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	MTIF2	P46199	727 aa	Known RBP	15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	PMS1	P54277	932 aa	Known RBP	15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	APBA1	Q02410	837 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	CNNM4	Q6P4Q7	775 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	FOXR1	Q6PIV2	292 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	CCDC84	Q86UT8	332 aa	Predicted RBP	15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	CNOT6L	Q96LI5	555 aa	Known RBP	15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	LACRT	Q9GZZ8	138 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	ATXN2	Q99700	1313 aa	Known RBP	15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	AGPS	O00116	658 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	GNPAT	O15228	680 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	ICE2	Q659A1	982 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	AMIGO3	Q86WK7	504 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	CREG2	Q8IUH2	290 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	LZTS2	Q9BRK4	669 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	NOC4L	Q9BVI4	516 aa	Known RBP	15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	EDEM3	Q9BZQ6	932 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	SH2D4A	Q9H788	454 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	KAT14	Q9H8E8	782 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	AGPAT5	Q9NUQ2	364 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	RTCB	Q9Y3I0	505 aa	Known RBP	15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	HYOU1	Q9Y4L1	999 aa		15.15	■□□□□ 0.02
IFT122-222	ENST00000511425	BAZ2A	Q9UIF9	1905 aa	Known RBP	15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	IRS2	Q9Y4H2	1338 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	SHTN1	A0MZ66	631 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	EBAG9	O00559	213 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	KLRK1	P26718	216 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	MECOM	Q03112	1051 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	FOXR2	Q6PJQ5	311 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	TADA2B	Q86TJ2	420 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	SPATS2	Q86XZ4	545 aa	Known RBP	15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	CAVIN3	Q969G5	261 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	PCMTD1	Q96MG8	357 aa	Predicted RBP	15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	IFIH1	Q9BYX4	1025 aa	Known RBP	15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	COL24A1	Q17RW2	1714 aa		15.14	■□□□□ 0.01
IFT122-222	ENST00000511425	SMIM22	K7EJ46	135 aa		15.13	■□□□□ 0.01
IFT122-222	ENST00000511425	CCDC96	Q2M329	555 aa		15.13	■□□□□ 0.01
IFT122-222	ENST00000511425	ARHGEF1	Q92888	912 aa	Known RBP	15.13	■□□□□ 0.01
IFT122-222	ENST00000511425	CAPS2	Q9BXY5	557 aa		15.13	■□□□□ 0.01
IFT122-222	ENST00000511425	YY1AP1	Q9H869	796 aa		15.13	■□□□□ 0.01
IFT122-222	ENST00000511425	RNF216	Q9NWF9	866 aa	Predicted RBP	15.13	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms