RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 DNAJA2O60884 412 aa8.13□□□□□ -1.11
GYPB-212ENST00000511198 HTR3BO95264 441 aa8.13□□□□□ -1.11
GYPB-212ENST00000511198 ZNF16P17020 682 aaPredicted RBP8.13□□□□□ -1.11
GYPB-212ENST00000511198 TMCO4Q5TGY1 634 aa8.13□□□□□ -1.11
GYPB-212ENST00000511198 THAP5Q7Z6K1 395 aa8.13□□□□□ -1.11
GYPB-212ENST00000511198 MCOLN1Q9GZU1 580 aa8.13□□□□□ -1.11
GYPB-212ENST00000511198 CARS2Q9HA77 564 aaKnown RBP8.13□□□□□ -1.11
GYPB-212ENST00000511198 TNRC6CQ9HCJ0 1690 aaKnown RBP8.13□□□□□ -1.11
GYPB-212ENST00000511198 GPRASP1Q5JY77 1395 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 ZBTB7CA1YPR0 619 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 CHURC1-FNTBB4DL54 471 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 EIF4A3P38919 411 aaKnown RBP8.12□□□□□ -1.11
GYPB-212ENST00000511198 YARSP54577 528 aaKnown RBP8.12□□□□□ -1.11
GYPB-212ENST00000511198 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
GYPB-212ENST00000511198 UBE2FQ969M7 185 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 PKD1L3Q7Z443 1732 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 USP6P35125 1406 aa8.12□□□□□ -1.11
GYPB-212ENST00000511198 PLEKHG2Q9H7P9 1386 aa8.11□□□□□ -1.11
GYPB-212ENST00000511198 OGFOD2Q6N063 350 aa8.11□□□□□ -1.11
GYPB-212ENST00000511198 ZSWIM5Q9P217 1185 aa8.11□□□□□ -1.11
GYPB-212ENST00000511198 CTNND2Q9UQB3 1225 aa8.11□□□□□ -1.11
GYPB-212ENST00000511198 ANKRD50Q9ULJ7 1429 aa8.11□□□□□ -1.11
GYPB-212ENST00000511198 ABCC11Q96J66 1382 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 TLR3O15455 904 aaKnown RBP8.1□□□□□ -1.11
GYPB-212ENST00000511198 FXR1P51114 621 aaKnown RBP eCLIP8.1□□□□□ -1.11
GYPB-212ENST00000511198 SOX10P56693 466 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 LCE3BQ5TA77 95 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 TMEM132EQ6IEE7 984 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 HS2ST1Q7LGA3 356 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 KRTAP1-3Q8IUG1 177 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 ZNF296Q8WUU4 475 aaPredicted RBP8.1□□□□□ -1.11
GYPB-212ENST00000511198 GCC1Q96CN9 775 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 DUSP15Q9H1R2 295 aaPredicted RBP8.1□□□□□ -1.11
GYPB-212ENST00000511198 ADAMTS1Q9UHI8 967 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 SUPT16HQ9Y5B9 1047 aaKnown RBP8.1□□□□□ -1.11
GYPB-212ENST00000511198 WNK3Q9BYP7 1800 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 CPDO75976 1380 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 ANKRD30BQ9BXX2 1392 aa8.1□□□□□ -1.11
GYPB-212ENST00000511198 WASH4PA8MWX3 477 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 EXOC5O00471 708 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 VEGFAP15692 232 aaPredicted RBP8.09□□□□□ -1.11
GYPB-212ENST00000511198 CRKP46108 304 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 SMIM5Q71RC9 77 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 SLC17A8Q8NDX2 589 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 BAHD1Q8TBE0 780 aaPredicted RBP8.09□□□□□ -1.11
GYPB-212ENST00000511198 FAM168AQ92567 244 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 BRMS1Q9HCU9 246 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 KLHL3Q9UH77 587 aa8.09□□□□□ -1.11
GYPB-212ENST00000511198 ESR1P03372 595 aa8.08□□□□□ -1.12
GYPB-212ENST00000511198 SRFP11831 508 aa8.08□□□□□ -1.12
GYPB-212ENST00000511198 MFAP1P55081 439 aaKnown RBP8.08□□□□□ -1.12
GYPB-212ENST00000511198 CWF19L2Q2TBE0 894 aaKnown RBP8.08□□□□□ -1.12
GYPB-212ENST00000511198 POU5F2Q8N7G0 328 aa8.08□□□□□ -1.12
GYPB-212ENST00000511198 DTWD2Q8NBA8 298 aa8.08□□□□□ -1.12
GYPB-212ENST00000511198 CCDC74BQ96LY2 380 aa8.08□□□□□ -1.12
GYPB-212ENST00000511198 KIAA1551Q9HCM1 1747 aa8.08□□□□□ -1.12
GYPB-212ENST00000511198 ANKARQ7Z5J8 1434 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 LRRN2O75325 713 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 GAB4Q2WGN9 574 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 TOM1L2Q6ZVM7 507 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 RNF141Q8WVD5 230 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 GPR62Q9BZJ7 368 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 RNF181Q9P0P0 153 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 QRICH2Q9H0J4 1663 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
GYPB-212ENST00000511198 A0A0G2JLW4 131 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 SLC22A31A6NKX4 558 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 ATE1O95260 518 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 FYB2Q5VWT5 728 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 TMPRSS7Q7RTY8 843 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 TMEM87AQ8NBN3 555 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 NGDNQ8NEJ9 315 aaKnown RBP8.06□□□□□ -1.12
GYPB-212ENST00000511198 VWCEQ96DN2 955 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 KREMEN1Q96MU8 473 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 BACH2Q9BYV9 841 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 BCL11AQ9H165 835 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 UBP1Q9NZI7 540 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 PCDHB14Q9Y5E9 798 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 COL18A1P39060 1754 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 KNDC1Q76NI1 1749 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 COL6A3P12111 3177 aa8.06□□□□□ -1.12
GYPB-212ENST00000511198 N4BP2Q86UW6 1770 aaPredicted RBP8.05□□□□□ -1.12
GYPB-212ENST00000511198 TPP2P29144 1249 aaPredicted RBP8.05□□□□□ -1.12
GYPB-212ENST00000511198 GDNFP39905 211 aa8.05□□□□□ -1.12
GYPB-212ENST00000511198 MAP2K1Q02750 393 aaPredicted RBP8.05□□□□□ -1.12
GYPB-212ENST00000511198 TMEM40Q8WWA1 233 aa8.05□□□□□ -1.12
GYPB-212ENST00000511198 KIF2CQ99661 725 aa8.05□□□□□ -1.12
GYPB-212ENST00000511198 EHMT1Q9H9B1 1298 aa8.05□□□□□ -1.12
GYPB-212ENST00000511198 RGS13O14921 159 aa8.04□□□□□ -1.12
GYPB-212ENST00000511198 TNNI2P48788 182 aa8.04□□□□□ -1.12
GYPB-212ENST00000511198 SAFB2Q14151 953 aaKnown RBP eCLIP8.04□□□□□ -1.12
GYPB-212ENST00000511198 ZSWIM9Q86XI8 627 aa8.04□□□□□ -1.12
GYPB-212ENST00000511198 PHACTR4Q8IZ21 702 aa8.04□□□□□ -1.12
GYPB-212ENST00000511198 ALPK1Q96QP1 1244 aa8.04□□□□□ -1.12
GYPB-212ENST00000511198 TRIT1Q9H3H1 467 aaKnown RBP8.04□□□□□ -1.12
GYPB-212ENST00000511198 KCNH3Q9ULD8 1083 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms