RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CCDC82Q8N4S0 544 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 FANCBQ8NB91 859 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 DPF3Q92784 378 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 KATNBL1Q9H079 304 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 C11orf49Q9H6J7 331 aa16.21■□□□□ 0.19
DDX41-212ENST00000511040 PNMA6FA0A0J9YX94 578 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 OPLAHO14841 1288 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 ADCY6O43306 1168 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 GNAQP50148 359 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 APOBRQ0VD83 1088 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 CCDC144BQ3MJ40 725 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 RGS22Q8NE09 1264 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 SYTL5Q8TDW5 730 aaPredicted RBP16.2■□□□□ 0.18
DDX41-212ENST00000511040 RRP36Q96EU6 259 aaKnown RBP16.2■□□□□ 0.18
DDX41-212ENST00000511040 LZTS2Q9BRK4 669 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 SPZ1Q9BXG8 430 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 ABHD16BQ9H3Z7 469 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 XPNPEP3Q9NQH7 507 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 COL20A1Q9P218 1284 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 ADD3Q9UEY8 706 aaKnown RBP16.2■□□□□ 0.18
DDX41-212ENST00000511040 FAM184BQ9ULE4 1060 aa16.2■□□□□ 0.18
DDX41-212ENST00000511040 ZBTB43O43298 467 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 CFBP00751 764 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 PTGS1P23219 599 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 PSMA5P28066 241 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 RTN1Q16799 776 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 NOL8Q76FK4 1167 aaKnown RBP16.19■□□□□ 0.18
DDX41-212ENST00000511040 MCF2L2Q86YR7 1114 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 ARRDC4Q8NCT1 418 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 BRF1Q92994 677 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 TAAR1Q96RJ0 339 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 HTATIP2Q9BUP3 242 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 PDGFCQ9NRA1 345 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 PDE4DIPQ5VU43 2346 aa16.19■□□□□ 0.18
DDX41-212ENST00000511040 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.18■□□□□ 0.18
DDX41-212ENST00000511040 GOLGA8AA7E2F4 631 aa16.18■□□□□ 0.18
DDX41-212ENST00000511040 GOLGA8BA8MQT2 603 aa16.18■□□□□ 0.18
DDX41-212ENST00000511040 DNM1LO00429 736 aa16.18■□□□□ 0.18
DDX41-212ENST00000511040 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
DDX41-212ENST00000511040 HOXA13P31271 388 aaPredicted RBP16.18■□□□□ 0.18
DDX41-212ENST00000511040 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
DDX41-212ENST00000511040 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
DDX41-212ENST00000511040 PDE4DQ08499 809 aa16.18■□□□□ 0.18
DDX41-212ENST00000511040 LRRC41Q15345 812 aa16.18■□□□□ 0.18
DDX41-212ENST00000511040 UPF3BQ9BZI7 483 aaKnown RBP16.18■□□□□ 0.18
DDX41-212ENST00000511040 SENP6Q9GZR1 1112 aaPredicted RBP16.18■□□□□ 0.18
DDX41-212ENST00000511040 SEC63Q9UGP8 760 aaKnown RBP16.18■□□□□ 0.18
DDX41-212ENST00000511040 LRRC37A2A6NM11 1700 aa16.18■□□□□ 0.18
DDX41-212ENST00000511040 KBTBD13C9JR72 458 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 SEC24BO95487 1268 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 COL6A1P12109 1028 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 SMARCA1P28370 1054 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 RUFY3Q7L099 469 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 MORC4Q8TE76 937 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 FERMT2Q96AC1 680 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
DDX41-212ENST00000511040 ZSWIM6Q9HCJ5 1215 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 SYNRGQ9UMZ2 1314 aa16.17■□□□□ 0.18
DDX41-212ENST00000511040 MYADML2A6NDP7 307 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 DUSP11O75319 330 aaKnown RBP16.16■□□□□ 0.18
DDX41-212ENST00000511040 EIF2AK2P19525 551 aaKnown RBP16.16■□□□□ 0.18
DDX41-212ENST00000511040 CDC27P30260 824 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 HSD17B4P51659 736 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 ATN1P54259 1190 aaPredicted RBP16.16■□□□□ 0.18
DDX41-212ENST00000511040 TNFAIP2Q03169 654 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 TAPT1Q6NXT6 567 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 RMDN3Q96TC7 470 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 VTA1Q9NP79 307 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 FAM217BQ9NTX9 383 aaPredicted RBP16.16■□□□□ 0.18
DDX41-212ENST00000511040 RBM28Q9NW13 759 aaKnown RBP16.16■□□□□ 0.18
DDX41-212ENST00000511040 CYP46A1Q9Y6A2 500 aa16.16■□□□□ 0.18
DDX41-212ENST00000511040 ALPK3Q96L96 1907 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 H0YGN5 161 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
DDX41-212ENST00000511040 EVI5O60447 810 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 SMPD1P17405 629 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 EDNRBP24530 442 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 TRAF1Q13077 416 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 LRRC26Q2I0M4 334 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 ARHGEF16Q5VV41 709 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 RNF180Q86T96 592 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 FCHSD1Q86WN1 690 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 C7orf61Q8IZ16 206 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 NSUN6Q8TEA1 469 aaKnown RBP16.15■□□□□ 0.18
DDX41-212ENST00000511040 GPKOWQ92917 476 aaPredicted RBP eCLIP16.15■□□□□ 0.18
DDX41-212ENST00000511040 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
DDX41-212ENST00000511040 CNTNAP5Q8WYK1 1306 aa16.15■□□□□ 0.18
DDX41-212ENST00000511040 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
DDX41-212ENST00000511040 ADD1P35611 737 aaKnown RBP16.14■□□□□ 0.17
DDX41-212ENST00000511040 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.173e-6■■■■□ 22.7
DDX41-212ENST00000511040 FUT2Q10981 343 aa16.14■□□□□ 0.17
DDX41-212ENST00000511040 PRPF38BQ5VTL8 546 aaKnown RBP16.14■□□□□ 0.17
DDX41-212ENST00000511040 HEATR3Q7Z4Q2 680 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms