RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 PTCHD1Q96NR3 888 aa11.03□□□□□ -0.64
USP53-206ENST00000510737 BCL11AQ9H165 835 aa11.03□□□□□ -0.64
USP53-206ENST00000510737 GINM1Q9NU53 330 aa11.03□□□□□ -0.64
USP53-206ENST00000510737 TSPOAP1O95153 1857 aa11.02□□□□□ -0.64
USP53-206ENST00000510737 FFAR3O14843 346 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 SRGAP3O43295 1099 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 SASH1O94885 1247 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 CD3EP07766 207 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 TACR1P25103 407 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 KRTAP10-2P60368 255 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 NR1I3Q14994 352 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 ZDHHC15Q96MV8 337 aa11.02□□□□□ -0.65
USP53-206ENST00000510737 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
USP53-206ENST00000510737 CUX1P39880 1505 aa11.01□□□□□ -0.65
USP53-206ENST00000510737 PAQR3Q6TCH7 311 aa11.01□□□□□ -0.65
USP53-206ENST00000510737 CYP2R1Q6VVX0 501 aa11.01□□□□□ -0.65
USP53-206ENST00000510737 RNF34Q969K3 372 aa11.01□□□□□ -0.65
USP53-206ENST00000510737 PDLIM7Q9NR12 457 aa11.01□□□□□ -0.65
USP53-206ENST00000510737 ADAMTS12P58397 1594 aa11□□□□□ -0.65
USP53-206ENST00000510737 ADCY10Q96PN6 1610 aa11□□□□□ -0.65
USP53-206ENST00000510737 A0A1W2PQ27 194 aa11□□□□□ -0.65
USP53-206ENST00000510737 A0A1W2PQ64 194 aa11□□□□□ -0.65
USP53-206ENST00000510737 A0A1W2PQC6 194 aa11□□□□□ -0.65
USP53-206ENST00000510737 A0A1W2PQD8 194 aa11□□□□□ -0.65
USP53-206ENST00000510737 RECKO95980 971 aa11□□□□□ -0.65
USP53-206ENST00000510737 CYBBP04839 570 aa11□□□□□ -0.65
USP53-206ENST00000510737 ATF2P15336 505 aa11□□□□□ -0.65
USP53-206ENST00000510737 SKOR2Q2VWA4 1001 aaPredicted RBP11□□□□□ -0.65
USP53-206ENST00000510737 CXorf38Q8TB03 319 aa11□□□□□ -0.65
USP53-206ENST00000510737 ADAM7Q9H2U9 754 aa11□□□□□ -0.65
USP53-206ENST00000510737 FBLN5Q9UBX5 448 aa11□□□□□ -0.65
USP53-206ENST00000510737 PPRC1Q5VV67 1664 aaKnown RBP10.99□□□□□ -0.65
USP53-206ENST00000510737 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
USP53-206ENST00000510737 ITGA4P13612 1032 aa10.99□□□□□ -0.65
USP53-206ENST00000510737 NOP2P46087 812 aaKnown RBP10.99□□□□□ -0.65
USP53-206ENST00000510737 PAK2Q13177 524 aa10.99□□□□□ -0.65
USP53-206ENST00000510737 PPP2R5DQ14738 602 aa10.99□□□□□ -0.65
USP53-206ENST00000510737 BICRALQ6AI39 1079 aa10.99□□□□□ -0.65
USP53-206ENST00000510737 HAUS7Q99871 368 aa10.99□□□□□ -0.65
USP53-206ENST00000510737 LUC7LQ9NQ29 371 aaKnown RBP10.99□□□□□ -0.65
USP53-206ENST00000510737 PCDHB10Q9UN67 800 aa10.99□□□□□ -0.65
USP53-206ENST00000510737 SYN1P17600 705 aa10.98□□□□□ -0.65
USP53-206ENST00000510737 ADCY4Q8NFM4 1077 aa10.98□□□□□ -0.65
USP53-206ENST00000510737 SF3B6Q9Y3B4 125 aaKnown RBP10.98□□□□□ -0.65
USP53-206ENST00000510737 A0A087WZG4 1122 aa10.97□□□□□ -0.65
USP53-206ENST00000510737 PRR5P85299 388 aa10.97□□□□□ -0.65
USP53-206ENST00000510737 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
USP53-206ENST00000510737 METTL16Q86W50 562 aaKnown RBP10.97□□□□□ -0.65
USP53-206ENST00000510737 ADGRG2Q8IZP9 1017 aa10.97□□□□□ -0.65
USP53-206ENST00000510737 NLGN2Q8NFZ4 835 aa10.97□□□□□ -0.65
USP53-206ENST00000510737 KLHL25Q9H0H3 589 aa10.97□□□□□ -0.65
USP53-206ENST00000510737 RXFP1Q9HBX9 757 aa10.97□□□□□ -0.65
USP53-206ENST00000510737 ZC3H12DA2A288 527 aaKnown RBP10.96□□□□□ -0.65
USP53-206ENST00000510737 POU4F1Q01851 419 aa10.96□□□□□ -0.65
USP53-206ENST00000510737 TMCO4Q5TGY1 634 aa10.96□□□□□ -0.65
USP53-206ENST00000510737 SP8Q8IXZ3 490 aa10.96□□□□□ -0.65
USP53-206ENST00000510737 EFR3BQ9Y2G0 817 aa10.96□□□□□ -0.65
USP53-206ENST00000510737 F8W031 263 aaPredicted RBP10.95□□□□□ -0.66
USP53-206ENST00000510737 PPP1R11O60927 126 aaPredicted RBP10.95□□□□□ -0.66
USP53-206ENST00000510737 VAMP4O75379 141 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 GLI4P10075 376 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 L1CAMP32004 1257 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 MC3RP41968 323 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 SOX9P48436 509 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 CORO7P57737 925 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 RCSD1Q6JBY9 416 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 BCAS3Q9H6U6 928 aa10.95□□□□□ -0.66
USP53-206ENST00000510737 DIS3Q9Y2L1 958 aaKnown RBP10.95□□□□□ -0.66
USP53-206ENST00000510737 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 A0A1B0GTL3 188 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 A0A1W2PQH9 124 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 AURKAO14965 403 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 PFKLP17858 780 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 TCEAL1Q15170 157 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 GNPTABQ3T906 1256 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 KLHL6Q8WZ60 621 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 WHRNQ9P202 907 aa10.94□□□□□ -0.66
USP53-206ENST00000510737 STXBP3O00186 592 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 TBC1D8O95759 1140 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 GIPRP48546 466 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 SLURP1P55000 103 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 FOXO4P98177 505 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 CAP1Q01518 475 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 FNIP1Q8TF40 1166 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 FGD4Q96M96 766 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 SUSD2Q9UGT4 822 aa10.93□□□□□ -0.66
USP53-206ENST00000510737 DISP3Q9P2K9 1392 aa10.92□□□□□ -0.66
USP53-206ENST00000510737 A0A1W2PQJ5 194 aa10.92□□□□□ -0.66
USP53-206ENST00000510737 EPHX1P07099 455 aa10.92□□□□□ -0.66
USP53-206ENST00000510737 HTRA3P83110 453 aa10.92□□□□□ -0.66
USP53-206ENST00000510737 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
USP53-206ENST00000510737 JAG2Q9Y219 1238 aa10.92□□□□□ -0.66
USP53-206ENST00000510737 ASGR2P07307 311 aa10.91□□□□□ -0.66
USP53-206ENST00000510737 DLX2Q07687 328 aaPredicted RBP10.91□□□□□ -0.66
USP53-206ENST00000510737 COL9A2Q14055 689 aaPredicted RBP10.91□□□□□ -0.66
USP53-206ENST00000510737 TARBP2Q15633 366 aaKnown RBP10.91□□□□□ -0.66
USP53-206ENST00000510737 DPY19L1Q2PZI1 675 aa10.91□□□□□ -0.66
USP53-206ENST00000510737 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
USP53-206ENST00000510737 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms