RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 OTOP2Q7RTS6 562 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 DCAF4Q8WV16 495 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 COPS5Q92905 334 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 Q9Y3F1 56 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 SCN5AQ14524 2016 aa18.82■□□□□ 0.6
RAB40C-202ENST00000509637 CHD7Q9P2D1 2997 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 TLR3O15455 904 aaKnown RBP18.81■□□□□ 0.6
RAB40C-202ENST00000509637 FGBP02675 491 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
RAB40C-202ENST00000509637 PDHBP11177 359 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 CYP2C9P11712 490 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 NMIQ13287 307 aaPredicted RBP18.81■□□□□ 0.6
RAB40C-202ENST00000509637 DUSP28Q4G0W2 176 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 RRP12Q5JTH9 1297 aaKnown RBP18.81■□□□□ 0.6
RAB40C-202ENST00000509637 TBC1D10CQ8IV04 446 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 PPM1EQ8WY54 764 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 TBC1D5Q92609 795 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 EVI5LQ96CN4 794 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 AP5M1Q9H0R1 490 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 VTA1Q9NP79 307 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 HELLSQ9NRZ9 838 aa18.81■□□□□ 0.6
RAB40C-202ENST00000509637 TRMT13Q9NUP7 481 aaKnown RBP18.81■□□□□ 0.6
RAB40C-202ENST00000509637 TOP1P11387 765 aaKnown RBP18.8■□□□□ 0.6
RAB40C-202ENST00000509637 PSRC1Q6PGN9 363 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-202ENST00000509637 ALDH8A1Q9H2A2 487 aaPredicted RBP18.8■□□□□ 0.6
RAB40C-202ENST00000509637 TCP11L1Q9NUJ3 509 aa18.8■□□□□ 0.6
RAB40C-202ENST00000509637 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
RAB40C-202ENST00000509637 TET1Q8NFU7 2136 aa18.79■□□□□ 0.6
RAB40C-202ENST00000509637 CABYRO75952 493 aa18.79■□□□□ 0.6
RAB40C-202ENST00000509637 ARHGEF15O94989 841 aa18.79■□□□□ 0.6
RAB40C-202ENST00000509637 SNHG28P0DPA3 235 aa18.79■□□□□ 0.6
RAB40C-202ENST00000509637 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
RAB40C-202ENST00000509637 PURAQ00577 322 aaKnown RBP18.79■□□□□ 0.6
RAB40C-202ENST00000509637 TTLL4Q14679 1199 aa18.79■□□□□ 0.6
RAB40C-202ENST00000509637 WDR11Q9BZH6 1224 aa18.79■□□□□ 0.6
RAB40C-202ENST00000509637 ARIH2O95376 493 aa18.78■□□□□ 0.6
RAB40C-202ENST00000509637 EDNRBP24530 442 aa18.78■□□□□ 0.6
RAB40C-202ENST00000509637 ZNF543Q08ER8 600 aa18.78■□□□□ 0.6
RAB40C-202ENST00000509637 CCDC85BQ15834 202 aaPredicted RBP18.78■□□□□ 0.6
RAB40C-202ENST00000509637 MCMDC2Q4G0Z9 681 aa18.78■□□□□ 0.6
RAB40C-202ENST00000509637 PTPDC1A2A3K4 754 aa18.77■□□□□ 0.6
RAB40C-202ENST00000509637 GOLGA8HP0CJ92 632 aa18.77■□□□□ 0.6
RAB40C-202ENST00000509637 CALML3P27482 149 aa18.77■□□□□ 0.6
RAB40C-202ENST00000509637 RPS6P62753 249 aaKnown RBP18.77■□□□□ 0.6
RAB40C-202ENST00000509637 CTAGE1Q96RT6 745 aa18.77■□□□□ 0.6
RAB40C-202ENST00000509637 ZKSCAN3Q9BRR0 538 aa18.77■□□□□ 0.6
RAB40C-202ENST00000509637 TOMM22Q9NS69 142 aa18.77■□□□□ 0.6
RAB40C-202ENST00000509637 NEDD4P46934 1319 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 RFXAPO00287 272 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 MYL3P08590 195 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 HDAC1Q13547 482 aaPredicted RBP18.76■□□□□ 0.59
RAB40C-202ENST00000509637 GPNMBQ14956 572 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 NBPF20Q3BBV1 942 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 TJAP1Q5JTD0 557 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 PPP4R3BQ5MIZ7 849 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 AKNAD1Q5T1N1 836 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 UBA5Q9GZZ9 404 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 COL20A1Q9P218 1284 aa18.76■□□□□ 0.59
RAB40C-202ENST00000509637 REV3LO60673 3130 aa18.75■□□□□ 0.59
RAB40C-202ENST00000509637 EPOPA6NHQ4 379 aa18.75■□□□□ 0.59
RAB40C-202ENST00000509637 SPRED2Q7Z698 418 aa18.75■□□□□ 0.59
RAB40C-202ENST00000509637 LNPKQ9C0E8 428 aa18.75■□□□□ 0.59
RAB40C-202ENST00000509637 TNKSO95271 1327 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 ZEB2O60315 1214 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 CCDC62Q6P9F0 684 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 RNF207Q6ZRF8 634 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 DEFB128Q7Z7B8 93 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 OR6J1Q8NGC5 347 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 GAS2L1Q99501 681 aaPredicted RBP18.74■□□□□ 0.59
RAB40C-202ENST00000509637 MSRAQ9UJ68 235 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 ZMYM6O95789 1325 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
RAB40C-202ENST00000509637 TRIP12Q14669 1992 aaPredicted RBP18.73■□□□□ 0.59
RAB40C-202ENST00000509637 A6NJR5 290 aa18.73■□□□□ 0.59
RAB40C-202ENST00000509637 IGFBP4P22692 258 aa18.73■□□□□ 0.59
RAB40C-202ENST00000509637 RAB30Q15771 203 aa18.73■□□□□ 0.59
RAB40C-202ENST00000509637 TCTN1Q2MV58 587 aa18.73■□□□□ 0.59
RAB40C-202ENST00000509637 TAAR1Q96RJ0 339 aa18.73■□□□□ 0.59
RAB40C-202ENST00000509637 ADD3Q9UEY8 706 aaKnown RBP18.73■□□□□ 0.59
RAB40C-202ENST00000509637 PRRC2BQ5JSZ5 2229 aaKnown RBP18.73■□□□□ 0.59
RAB40C-202ENST00000509637 MUC3AQ02505 3323 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 PTPRSQ13332 1948 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 TCF20Q9UGU0 1960 aaKnown RBP18.72■□□□□ 0.59
RAB40C-202ENST00000509637 IGHDP01880 384 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 KRT40Q6A162 431 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 TTC14Q96N46 770 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 ASB2Q96Q27 587 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 MTG1Q9BT17 334 aaPredicted RBP18.72■□□□□ 0.59
RAB40C-202ENST00000509637 IL25Q9H293 177 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 SLC28A3Q9HAS3 691 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 POLR3EQ9NVU0 708 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 RAPGEFL1Q9UHV5 662 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 SLC4A7Q9Y6M7 1214 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 WDR19Q8NEZ3 1342 aa18.72■□□□□ 0.59
RAB40C-202ENST00000509637 LOC102724159A0A0B4J2E5 919 aa18.71■□□□□ 0.59
RAB40C-202ENST00000509637 SDSP20132 328 aa18.71■□□□□ 0.59
RAB40C-202ENST00000509637 PWP2Q15269 919 aaKnown RBP18.71■□□□□ 0.59
RAB40C-202ENST00000509637 USH1GQ495M9 461 aa18.71■□□□□ 0.59
RAB40C-202ENST00000509637 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms