RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 SIGLEC14Q08ET2 396 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 RPAINQ86UA6 219 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 NOD1Q9Y239 953 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
HMGCR-208ENST00000509431 H3BNC9 293 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 CXCL10P02778 98 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 LTBRP36941 435 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 NBL1P41271 181 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 EVX2Q03828 476 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 CTC1Q2NKJ3 1217 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 ALDH1L2Q3SY69 923 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 DUSP28Q4G0W2 176 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 BRDTQ58F21 947 aaPredicted RBP16.4■□□□□ 0.22
HMGCR-208ENST00000509431 TAPT1Q6NXT6 567 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 SLC38A10Q9HBR0 1119 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 RAVER2Q9HCJ3 691 aaKnown RBP16.4■□□□□ 0.22
HMGCR-208ENST00000509431 VTA1Q9NP79 307 aa16.4■□□□□ 0.22
HMGCR-208ENST00000509431 MYO7AQ13402 2215 aa16.39■□□□□ 0.22
HMGCR-208ENST00000509431 SOWAHBA6NEL2 793 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 H0Y858 1186 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 KPNA6O60684 536 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 MYL3P08590 195 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 VCPP55072 806 aaKnown RBP16.39■□□□□ 0.21
HMGCR-208ENST00000509431 GPM6BQ13491 265 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 IKBKEQ14164 716 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 EPC2Q52LR7 807 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 ACAD9Q9H845 621 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 DCP1AQ9NPI6 582 aaPredicted RBP16.39■□□□□ 0.21
HMGCR-208ENST00000509431 TLR9Q9NR96 1032 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 PDGFCQ9NRA1 345 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 COG6Q9Y2V7 657 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 COL4A6Q14031 1691 aa16.39■□□□□ 0.21
HMGCR-208ENST00000509431 MICAL3Q7RTP6 2002 aa16.38■□□□□ 0.21
HMGCR-208ENST00000509431 SELPP16109 830 aa16.38■□□□□ 0.21
HMGCR-208ENST00000509431 PTGS1P23219 599 aa16.38■□□□□ 0.21
HMGCR-208ENST00000509431 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
HMGCR-208ENST00000509431 KIAA1211Q6ZU35 1233 aa16.38■□□□□ 0.21
HMGCR-208ENST00000509431 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
HMGCR-208ENST00000509431 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
HMGCR-208ENST00000509431 RAD50Q92878 1312 aa16.38■□□□□ 0.21
HMGCR-208ENST00000509431 EPG5Q9HCE0 2579 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 GVINP1Q7Z2Y8 2422 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 GALR2O43603 387 aaPredicted RBP16.37■□□□□ 0.21
HMGCR-208ENST00000509431 FDX1P10109 184 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 CYP2D6P10635 497 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 CDK8P49336 464 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 HTRA4P83105 476 aaPredicted RBP16.37■□□□□ 0.21
HMGCR-208ENST00000509431 GPNMBQ14956 572 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 LRRC8DQ7L1W4 858 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 FBXO16Q8IX29 292 aaPredicted RBP16.37■□□□□ 0.21
HMGCR-208ENST00000509431 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
HMGCR-208ENST00000509431 CD207Q9UJ71 328 aa16.37■□□□□ 0.21
HMGCR-208ENST00000509431 RBL2Q08999 1139 aa16.36■□□□□ 0.21
HMGCR-208ENST00000509431 MCTP2Q6DN12 878 aa16.36■□□□□ 0.21
HMGCR-208ENST00000509431 FAM117BQ6P1L5 589 aa16.36■□□□□ 0.21
HMGCR-208ENST00000509431 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
HMGCR-208ENST00000509431 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
HMGCR-208ENST00000509431 A1CFQ9NQ94 594 aaKnown RBP16.36■□□□□ 0.21
HMGCR-208ENST00000509431 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
HMGCR-208ENST00000509431 RALGAPA2Q2PPJ7 1873 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 TPRP12270 2363 aaKnown RBP16.35■□□□□ 0.21
HMGCR-208ENST00000509431 MED19A0JLT2 244 aaPredicted RBP16.35■□□□□ 0.21
HMGCR-208ENST00000509431 LOC730098B7Z3J9 87 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 KDM4AO75164 1064 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 CBX2Q14781 532 aaPredicted RBP16.35■□□□□ 0.21
HMGCR-208ENST00000509431 CLUL1Q15846 466 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 PTGISQ16647 500 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 TKFCQ3LXA3 575 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 C16orf86Q6ZW13 317 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 EEPD1Q7L9B9 569 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 SDR42E1Q8WUS8 393 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 NKD2Q969F2 451 aaPredicted RBP16.35■□□□□ 0.21
HMGCR-208ENST00000509431 KIFC2Q96AC6 838 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 ASIC4Q96FT7 647 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 HOMER2Q9NSB8 354 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 FEM1BQ9UK73 627 aa16.35■□□□□ 0.21
HMGCR-208ENST00000509431 F5H6K3 240 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 NBNO60934 754 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 NDUFB10O96000 172 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 AMHP03971 560 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 KLRC3Q07444 240 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 TMEM192Q8IY95 271 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 ADSSL1Q8N142 457 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 OR6J1Q8NGC5 347 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 MORC4Q8TE76 937 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 LMAN2LQ9H0V9 348 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
HMGCR-208ENST00000509431 KMT2BQ9UMN6 2715 aaPredicted RBP16.33■□□□□ 0.21
HMGCR-208ENST00000509431 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.21
HMGCR-208ENST00000509431 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■■■■□ 24.3
HMGCR-208ENST00000509431 DLX2Q07687 328 aaPredicted RBP16.33■□□□□ 0.2
HMGCR-208ENST00000509431 TMEM63BQ5T3F8 832 aa16.33■□□□□ 0.2
HMGCR-208ENST00000509431 DGLUCYQ7Z3D6 616 aa16.33■□□□□ 0.2
HMGCR-208ENST00000509431 FBXO11Q86XK2 927 aa16.33■□□□□ 0.2
HMGCR-208ENST00000509431 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
HMGCR-208ENST00000509431 RNF146Q9NTX7 359 aa16.33■□□□□ 0.2
HMGCR-208ENST00000509431 NYAP2Q9P242 653 aa16.33■□□□□ 0.2
HMGCR-208ENST00000509431 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms