RNA–Protein interactions for RNA: ENST00000509385.1

TOB1-203, Transcript of transducer of ERBB2, 1, humanhuman

TSL 2

Gene TOB1, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOB1-203ENST00000509385 ALDH8A1Q9H2A2 487 aaPredicted RBP17.73■□□□□ 0.43
TOB1-203ENST00000509385 DDX49Q9Y6V7 483 aaKnown RBP17.73■□□□□ 0.43
TOB1-203ENST00000509385 CCND3P30281 292 aaPredicted RBP17.72■□□□□ 0.43
TOB1-203ENST00000509385 HOXA13P31271 388 aaPredicted RBP17.72■□□□□ 0.43
TOB1-203ENST00000509385 FUT2Q10981 343 aa17.72■□□□□ 0.43
TOB1-203ENST00000509385 SCRN1Q12765 414 aa17.72■□□□□ 0.43
TOB1-203ENST00000509385 RABEP1Q15276 862 aa17.72■□□□□ 0.43
TOB1-203ENST00000509385 CPLX2Q6PUV4 134 aaKnown RBP17.72■□□□□ 0.43
TOB1-203ENST00000509385 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.72■□□□□ 0.43
TOB1-203ENST00000509385 FAM133AQ8N9E0 248 aa17.72■□□□□ 0.43
TOB1-203ENST00000509385 TINF2Q9BSI4 451 aa17.72■□□□□ 0.43
TOB1-203ENST00000509385 HMX1Q9NP08 348 aaPredicted RBP17.72■□□□□ 0.43
TOB1-203ENST00000509385 DIS3Q9Y2L1 958 aaKnown RBP17.72■□□□□ 0.43
TOB1-203ENST00000509385 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.43
TOB1-203ENST00000509385 POLR2MP0CAP2 368 aa17.71■□□□□ 0.43
TOB1-203ENST00000509385 NAPAP54920 295 aa17.71■□□□□ 0.43
TOB1-203ENST00000509385 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
TOB1-203ENST00000509385 FCHSD1Q86WN1 690 aa17.71■□□□□ 0.43
TOB1-203ENST00000509385 ZHX1Q9UKY1 873 aaPredicted RBP17.71■□□□□ 0.43
TOB1-203ENST00000509385 NID2Q14112 1375 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 PFKFB2O60825 505 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 LARGE1O95461 756 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 ME3Q16798 604 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 ANO1Q5XXA6 986 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 WWC2Q6AWC2 1192 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 ARMCX2Q7L311 632 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 EEPD1Q7L9B9 569 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 TRIM22Q8IYM9 498 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 SYTL5Q8TDW5 730 aaPredicted RBP17.7■□□□□ 0.42
TOB1-203ENST00000509385 CUL5Q93034 780 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 FGD4Q96M96 766 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 TAAR1Q96RJ0 339 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.423e-7■■■□□ 16.3
TOB1-203ENST00000509385 ADD3Q9UEY8 706 aaKnown RBP17.7■□□□□ 0.42
TOB1-203ENST00000509385 CNPY2Q9Y2B0 182 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 RBBP6Q7Z6E9 1792 aaKnown RBP17.7■□□□□ 0.42
TOB1-203ENST00000509385 RPTORQ8N122 1335 aa17.7■□□□□ 0.42
TOB1-203ENST00000509385 ASB14A6NK59 587 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 OPLAHO14841 1288 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 PRPF3O43395 683 aaKnown RBP17.69■□□□□ 0.42
TOB1-203ENST00000509385 ST18O60284 1047 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 ALDH5A1P51649 535 aaPredicted RBP17.69■□□□□ 0.42
TOB1-203ENST00000509385 NTRK3Q16288 839 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 ARHGEF16Q5VV41 709 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 RGS22Q8NE09 1264 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 TRPV1Q8NER1 839 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.69■□□□□ 0.42
TOB1-203ENST00000509385 COL20A1Q9P218 1284 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 HTTP42858 3142 aa17.69■□□□□ 0.42
TOB1-203ENST00000509385 POTEFA5A3E0 1075 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 CDKL5O76039 1030 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
TOB1-203ENST00000509385 SCG2P13521 617 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 IFNAR1P17181 557 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 EIF2AK2P19525 551 aaKnown RBP17.68■□□□□ 0.42
TOB1-203ENST00000509385 PDE4DQ08499 809 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 PFKFB3Q16875 520 aaPredicted RBP17.68■□□□□ 0.42
TOB1-203ENST00000509385 USP17L6PQ6QN14 398 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 ZNF467Q7Z7K2 595 aaPredicted RBP17.68■□□□□ 0.42
TOB1-203ENST00000509385 RMDN3Q96TC7 470 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 MPHOSPH6Q99547 160 aaKnown RBP17.68■□□□□ 0.42
TOB1-203ENST00000509385 PSTPIP2Q9H939 334 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 ASTN1O14525 1302 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 SYNGAP1Q96PV0 1343 aa17.68■□□□□ 0.42
TOB1-203ENST00000509385 STXBP3O00186 592 aa17.67■□□□□ 0.42
TOB1-203ENST00000509385 SNAI1O95863 264 aaPredicted RBP17.67■□□□□ 0.42
TOB1-203ENST00000509385 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
TOB1-203ENST00000509385 HSD17B4P51659 736 aa17.67■□□□□ 0.42
TOB1-203ENST00000509385 UBE2SQ16763 222 aa17.67■□□□□ 0.42
TOB1-203ENST00000509385 MAP3K21Q5TCX8 1036 aa17.67■□□□□ 0.42
TOB1-203ENST00000509385 MSL3Q8N5Y2 521 aaKnown RBP17.67■□□□□ 0.42
TOB1-203ENST00000509385 GTF3C6Q969F1 213 aa17.67■□□□□ 0.42
TOB1-203ENST00000509385 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
TOB1-203ENST00000509385 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
TOB1-203ENST00000509385 LCTP09848 1927 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 MCM3APO60318 1980 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 SMCO2A6NFE2 343 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 MYCLP12524 364 aaPredicted RBP17.66■□□□□ 0.42
TOB1-203ENST00000509385 CYBAP13498 195 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 EN2P19622 333 aaPredicted RBP17.66■□□□□ 0.42
TOB1-203ENST00000509385 ACVR2BQ13705 512 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 MAMDC4Q6UXC1 1216 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 FBXO16Q8IX29 292 aaPredicted RBP17.66■□□□□ 0.42
TOB1-203ENST00000509385 NSUN6Q8TEA1 469 aaKnown RBP17.66■□□□□ 0.42
TOB1-203ENST00000509385 BARHL2Q9NY43 387 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
TOB1-203ENST00000509385 CENPFP49454 3210 aa17.65■□□□□ 0.42
TOB1-203ENST00000509385 B4DLN1 442 aa17.65■□□□□ 0.42
TOB1-203ENST00000509385 ADCY7P51828 1080 aa17.65■□□□□ 0.42
TOB1-203ENST00000509385 MRPL12P52815 198 aaKnown RBP17.65■□□□□ 0.42
TOB1-203ENST00000509385 FOSBP53539 338 aa17.65■□□□□ 0.42
TOB1-203ENST00000509385 PKN1Q16512 942 aa17.65■□□□□ 0.42
TOB1-203ENST00000509385 TYW1BQ6NUM6 668 aa17.65■□□□□ 0.42
TOB1-203ENST00000509385 DNERQ8NFT8 737 aa17.65■□□□□ 0.42
TOB1-203ENST00000509385 U2AF1L4Q8WU68 220 aaKnown RBP17.65■□□□□ 0.42
TOB1-203ENST00000509385 ZFP91Q96JP5 570 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms