RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 ASB14A6NK59 587 aa23.33■■□□□ 1.33
HOXC6-204ENST00000509328 CCND3P30281 292 aaPredicted RBP23.33■■□□□ 1.33
HOXC6-204ENST00000509328 ADD1P35611 737 aaKnown RBP23.33■■□□□ 1.33
HOXC6-204ENST00000509328 FUT2Q10981 343 aa23.33■■□□□ 1.33
HOXC6-204ENST00000509328 ANKRD1Q15327 319 aa23.33■■□□□ 1.33
HOXC6-204ENST00000509328 OPLAHO14841 1288 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 GJA8P48165 433 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 RBM25P49756 843 aaKnown RBP23.32■■□□□ 1.32
HOXC6-204ENST00000509328 GHRHRQ02643 423 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 SAMD3Q8N6K7 520 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 TRPV1Q8NER1 839 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 TBC1D5Q92609 795 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 DEFB118Q96PH6 123 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 MAP3K20Q9NYL2 800 aaKnown RBP23.32■■□□□ 1.32
HOXC6-204ENST00000509328 CNPY2Q9Y2B0 182 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 ASTN1O14525 1302 aa23.32■■□□□ 1.32
HOXC6-204ENST00000509328 LOC102724159A0A0B4J2E5 919 aa23.31■■□□□ 1.32
HOXC6-204ENST00000509328 SGPL1O95470 568 aa23.31■■□□□ 1.32
HOXC6-204ENST00000509328 SNAI1O95863 264 aaPredicted RBP23.31■■□□□ 1.32
HOXC6-204ENST00000509328 CAPN2P17655 700 aa23.31■■□□□ 1.32
HOXC6-204ENST00000509328 CNGA1P29973 690 aa23.31■■□□□ 1.32
HOXC6-204ENST00000509328 NEK4P51957 841 aa23.31■■□□□ 1.32
HOXC6-204ENST00000509328 PWP2Q15269 919 aaKnown RBP23.31■■□□□ 1.32
HOXC6-204ENST00000509328 PRAMEF19Q5SWL8 479 aa23.31■■□□□ 1.32
HOXC6-204ENST00000509328 ARMCX2Q7L311 632 aa23.31■■□□□ 1.32
HOXC6-204ENST00000509328 U2AF1L4Q8WU68 220 aaKnown RBP23.31■■□□□ 1.32
HOXC6-204ENST00000509328 PURBQ96QR8 312 aaKnown RBP23.31■■□□□ 1.32
HOXC6-204ENST00000509328 LARP6Q9BRS8 491 aaKnown RBP23.31■■□□□ 1.32
HOXC6-204ENST00000509328 LRRC37A2A6NM11 1700 aa23.3■■□□□ 1.32
HOXC6-204ENST00000509328 hCG_1642624A0A1W2PR95 340 aa23.3■■□□□ 1.32
HOXC6-204ENST00000509328 CFBP00751 764 aa23.3■■□□□ 1.32
HOXC6-204ENST00000509328 ALDH5A1P51649 535 aaPredicted RBP23.3■■□□□ 1.32
HOXC6-204ENST00000509328 HSD17B4P51659 736 aa23.3■■□□□ 1.32
HOXC6-204ENST00000509328 AK2P54819 239 aa23.3■■□□□ 1.32
HOXC6-204ENST00000509328 CCT2P78371 535 aaKnown RBP23.3■■□□□ 1.32
HOXC6-204ENST00000509328 DNERQ8NFT8 737 aa23.3■■□□□ 1.32
HOXC6-204ENST00000509328 SYTL5Q8TDW5 730 aaPredicted RBP23.3■■□□□ 1.32
HOXC6-204ENST00000509328 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.3■■□□□ 1.32
HOXC6-204ENST00000509328 V9GY48 417 aaPredicted RBP23.3■■□□□ 1.32
HOXC6-204ENST00000509328 MSCO60682 206 aa23.29■■□□□ 1.32
HOXC6-204ENST00000509328 EN2P19622 333 aaPredicted RBP23.29■■□□□ 1.32
HOXC6-204ENST00000509328 MORC4Q8TE76 937 aa23.29■■□□□ 1.32
HOXC6-204ENST00000509328 MPHOSPH6Q99547 160 aaKnown RBP23.29■■□□□ 1.32
HOXC6-204ENST00000509328 CRISPLD2Q9H0B8 497 aa23.29■■□□□ 1.32
HOXC6-204ENST00000509328 ABHD16BQ9H3Z7 469 aa23.29■■□□□ 1.32
HOXC6-204ENST00000509328 DDX20Q9UHI6 824 aaKnown RBP23.29■■□□□ 1.32
HOXC6-204ENST00000509328 SEPT4O43236 478 aa23.28■■□□□ 1.32
HOXC6-204ENST00000509328 ZNF865P0CJ78 1059 aaPredicted RBP23.28■■□□□ 1.32
HOXC6-204ENST00000509328 KIF2CQ99661 725 aa23.28■■□□□ 1.32
HOXC6-204ENST00000509328 NCOA5Q9HCD5 579 aaKnown RBP23.28■■□□□ 1.32
HOXC6-204ENST00000509328 RBM27Q9P2N5 1060 aaKnown RBP23.28■■□□□ 1.32
HOXC6-204ENST00000509328 BRCA2P51587 3418 aa23.28■■□□□ 1.32
HOXC6-204ENST00000509328 B4DLN1 442 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 GCOM1H8Y6P7 765 aaPredicted RBP23.27■■□□□ 1.32
HOXC6-204ENST00000509328 TFRCP02786 760 aaKnown RBP23.27■■□□□ 1.32
HOXC6-204ENST00000509328 POLR2MP0CAP2 368 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 IFNAR1P17181 557 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 MRPL12P52815 198 aaKnown RBP23.27■■□□□ 1.32
HOXC6-204ENST00000509328 STK3Q13188 491 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 ACVR2BQ13705 512 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 NTRK3Q16288 839 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 LHX8Q68G74 356 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 HEATR3Q7Z4Q2 680 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 SHISA4Q96DD7 197 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 TAAR1Q96RJ0 339 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 BACH2Q9BYV9 841 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 COL20A1Q9P218 1284 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 TPCN1Q9ULQ1 816 aa23.27■■□□□ 1.32
HOXC6-204ENST00000509328 hCG_1984214I3L0E3 225 aa23.26■■□□□ 1.31
HOXC6-204ENST00000509328 PRPF3O43395 683 aaKnown RBP23.26■■□□□ 1.31
HOXC6-204ENST00000509328 RGS19P49795 217 aa23.26■■□□□ 1.31
HOXC6-204ENST00000509328 ZNF713Q8N859 430 aaPredicted RBP23.26■■□□□ 1.31
HOXC6-204ENST00000509328 NSUN6Q8TEA1 469 aaKnown RBP23.26■■□□□ 1.31
HOXC6-204ENST00000509328 GPKOWQ92917 476 aaPredicted RBP eCLIP23.26■■□□□ 1.31
HOXC6-204ENST00000509328 SLKQ9H2G2 1235 aaPredicted RBP23.26■■□□□ 1.31
HOXC6-204ENST00000509328 ZHX1Q9UKY1 873 aaPredicted RBP23.26■■□□□ 1.31
HOXC6-204ENST00000509328 OGDHLQ9ULD0 1010 aa23.26■■□□□ 1.31
HOXC6-204ENST00000509328 CPLX1O14810 134 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 AKR1A1P14550 325 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 HOXA13P31271 388 aaPredicted RBP23.25■■□□□ 1.31
HOXC6-204ENST00000509328 AKAP17AQ02040 695 aaKnown RBP23.25■■□□□ 1.31
HOXC6-204ENST00000509328 PFKFB3Q16875 520 aaPredicted RBP23.25■■□□□ 1.31
HOXC6-204ENST00000509328 WWC2Q6AWC2 1192 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 CUL5Q93034 780 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 PHKBQ93100 1093 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 RMDN3Q96TC7 470 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 RNF26Q9BY78 433 aaPredicted RBP23.25■■□□□ 1.31
HOXC6-204ENST00000509328 KATNBL1Q9H079 304 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 KIAA1217Q5T5P2 1943 aa23.25■■□□□ 1.31
HOXC6-204ENST00000509328 PFKFB2O60825 505 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 EDNRBP24530 442 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 PDE4DQ08499 809 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 PPP1R18Q6NYC8 613 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 CPLX2Q6PUV4 134 aaKnown RBP23.24■■□□□ 1.31
HOXC6-204ENST00000509328 IWS1Q96ST2 819 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 PSTPIP2Q9H939 334 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 VTA1Q9NP79 307 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 FAM184BQ9ULE4 1060 aa23.24■■□□□ 1.31
HOXC6-204ENST00000509328 DDX49Q9Y6V7 483 aaKnown RBP23.24■■□□□ 1.31
HOXC6-204ENST00000509328 PIK3CDO00329 1044 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms