RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SLC1A4P43007 532 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 TROAPQ12815 778 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 CCDC96Q2M329 555 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 C8orf34Q49A92 452 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 SYDE2Q5VT97 1194 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 MYSM1Q5VVJ2 828 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 SNRNP48Q6IEG0 339 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 CCDC174Q6PII3 467 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 UBE2Q1Q7Z7E8 422 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 DGKHQ86XP1 1220 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 CLEC4DQ8WXI8 215 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 TATDN2Q93075 761 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 APBA2Q99767 749 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 MAD2L2Q9UI95 211 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 FEM1BQ9UK73 627 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 ZNFX1Q9P2E3 1918 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 NFIBO00712 420 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 PRC1O43663 620 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 PLEKHA8P1O95397 391 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 GNRH1P01148 92 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 RXRAP19793 462 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 CCND3P30281 292 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 STAT2P52630 851 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 EXOSC10Q01780 885 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 GRM4Q14833 912 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 ZNF792Q3KQV3 632 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 SLC9C1Q4G0N8 1177 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 SLC30A10Q6XR72 485 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 NCAPG2Q86XI2 1143 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 MB21D1Q8N884 522 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 SOCS4Q8WXH5 440 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 LENG1Q96BZ8 264 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 MTMR8Q96EF0 704 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 TEX13BQ9BXU2 312 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 KRT23Q9C075 422 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 UBA5Q9GZZ9 404 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 KATNBL1Q9H079 304 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 CNNM2Q9H8M5 875 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 A1CFQ9NQ94 594 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 PAK6Q9NQU5 681 aaPredicted RBP8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 HOXC10Q9NYD6 342 aa8.45□□□□□ -1.06
TOPBP1-207ENST00000509162 PALM3A6NDB9 673 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 SLC15A5A6NIM6 579 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 HMGCRP04035 888 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 CYBAP13498 195 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 CCL5P13501 91 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 EN2P19622 333 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 CYP2C19P33261 490 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 STAT3P40763 770 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 PRMT2P55345 433 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 CACNB2Q08289 660 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 PLS1Q14651 629 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 KIF22Q14807 665 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 CDC37Q16543 378 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 IFIT1BQ5T764 474 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 FAM160B2Q86V87 743 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 CPXCR1Q8N123 301 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 PRPF38AQ8NAV1 312 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 NCOA7Q8NI08 942 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 RAET1EQ8TD07 263 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 DIS3LQ8TF46 1054 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 TTC14Q96N46 770 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 USP26Q9BXU7 913 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 JMJD4Q9H9V9 463 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 HOMER2Q9NSB8 354 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 RNF146Q9NTX7 359 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 COL20A1Q9P218 1284 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 BRPF3Q9ULD4 1205 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 NID2Q14112 1375 aa8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 BAZ2BQ9UIF8 2168 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-207ENST00000509162 LAMA3Q16787 3333 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 SMAPO00193 183 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 IFIT3O14879 490 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 ADAMTS3O15072 1205 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 RGS19P49795 217 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 OAZ1P54368 228 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 CNTN2Q02246 1040 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 FUT2Q10981 343 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 QRICH1Q2TAL8 776 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 TMEM67Q5HYA8 995 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 TMEM63BQ5T3F8 832 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 WDR78Q5VTH9 848 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 PADI6Q6TGC4 694 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 IQCA1Q86XH1 822 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 ADGRF4Q8IZF3 695 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 ZNF654Q8IZM8 581 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 FAM133AQ8N9E0 248 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 BANK1Q8NDB2 785 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 TBC1D5Q92609 795 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 COA7Q96BR5 231 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 POM121Q96HA1 1249 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 MAML3Q96JK9 1138 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 UBAC1Q9BSL1 405 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 KAT14Q9H8E8 782 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 WDR19Q8NEZ3 1342 aa8.43□□□□□ -1.06
TOPBP1-207ENST00000509162 CNTNAP5Q8WYK1 1306 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms