RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ARFGEF1Q9Y6D6 1849 aa6.78□□□□□ -1.32
HMGB1P44-201ENST00000508597 TNRC6CQ9HCJ0 1690 aaKnown RBP6.77□□□□□ -1.32
HMGB1P44-201ENST00000508597 A0A0G2JLW4 131 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 FBXO24O75426 580 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 KCNA3P22001 575 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 HSP90AB4PQ58FF6 505 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 TAF7LQ5H9L4 462 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 EPHA10Q5JZY3 1008 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 DTHD1Q6ZMT9 781 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 SP8Q8IXZ3 490 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 SSH3Q8TE77 659 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 JARID2Q92833 1246 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 CRBNQ96SW2 442 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 MPHOSPH8Q99549 860 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 USP26Q9BXU7 913 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 VPS33BQ9H267 617 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 SOX17Q9H6I2 414 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 GREM2Q9H772 168 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 COPRSQ9NQ92 184 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 AKAP2Q9Y2D5 859 aa6.77□□□□□ -1.33
HMGB1P44-201ENST00000508597 COL11A2P13942 1736 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 GIPC1O14908 333 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 SRGAP3O43295 1099 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 GRIN3BO60391 1043 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 CIAO1O76071 339 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 DRD2P14416 443 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 GLB1P16278 677 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 MAOBP27338 520 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 CHRNA5P30532 468 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 RFX5P48382 616 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 ARL4DP49703 201 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 PTPN12Q05209 780 aaKnown RBP6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 PSMD2Q13200 908 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 CEP85Q6P2H3 762 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 LDHAL6AQ6ZMR3 332 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 RTKN2Q8IZC4 609 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 ARMC10Q8N2F6 343 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 ANKRD2Q9GZV1 360 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 NOP58Q9Y2X3 529 aaKnown RBP6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 ATP6V0A2Q9Y487 856 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 SLX4Q8IY92 1834 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 MROH5Q6ZUA9 1318 aa6.76□□□□□ -1.33
HMGB1P44-201ENST00000508597 EYA2O00167 538 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 SORBS3O60504 671 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 IL15P40933 162 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 G3BP1Q13283 466 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 HDAC1Q13547 482 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 CCDC93Q567U6 631 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 RASIP1Q5U651 963 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 ERC1Q8IUD2 1116 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 SUPT20HQ8NEM7 779 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 NLGN2Q8NFZ4 835 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 CELF1Q92879 486 aaKnown RBP6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 WDR89Q96FK6 387 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 PSMD1Q99460 953 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 RUSC1Q9BVN2 902 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 TMPRSS13Q9BYE2 586 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 ZC3H12CQ9C0D7 883 aaKnown RBP6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 SEMA6BQ9H3T3 888 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 RWDD1Q9H446 243 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 CNNM1Q9NRU3 951 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 LEMD3Q9Y2U8 911 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 TAF1P21675 1872 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 CACNA1SQ13698 1873 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 LTBP3Q9NS15 1303 aa6.75□□□□□ -1.33
HMGB1P44-201ENST00000508597 LRRC37AA6NMS7 1700 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 PNMA6EA0A0J9YXQ4 647 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 ADAM23O75077 832 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 RAB11FIP3O75154 756 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 PAGE1O75459 146 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 PREPP48147 710 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 RPS26P11Q5JNZ5 115 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 EXOC6Q8TAG9 804 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 GCC1Q96CN9 775 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 EYA3Q99504 573 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 C12orf49Q9H741 205 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 MINPP1Q9UNW1 487 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 RIPOR2Q9Y4F9 1068 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 AK5Q9Y6K8 562 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 XDHP47989 1333 aa6.74□□□□□ -1.33
HMGB1P44-201ENST00000508597 FER1L6Q2WGJ9 1857 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 DYRK3O43781 588 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 SURF6O75683 361 aaKnown RBP6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 USP17L7P0C7H9 530 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 TCF3P15923 654 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 UBE4AQ14139 1066 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 POU4F3Q15319 338 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 GPR162Q16538 588 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 DPP8Q6V1X1 898 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 CRELD1Q96HD1 420 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 FAM46AQ96IP4 442 aaKnown RBP6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 RTFDC1Q9BY42 306 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 DCTPP1Q9H773 170 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 GPR108Q9NPR9 543 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 VTI1BQ9UEU0 232 aa6.73□□□□□ -1.33
HMGB1P44-201ENST00000508597 SPEF2Q9C093 1822 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 MEGF11A6BM72 1044 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 ENC1O14682 589 aa6.72□□□□□ -1.33
HMGB1P44-201ENST00000508597 PDE8BO95263 885 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms