RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 SYT8Q8NBV8 401 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 ZNF512BQ96KM6 892 aaPredicted RBP5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 BRMS1Q9HCU9 246 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 TNFRSF10DQ9UBN6 386 aa5.56□□□□□ -1.52
SMARCA5-202ENST00000508573 WTIPA6NIX2 430 aaPredicted RBP5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 FADS2P1A8MWK0 482 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 CELA3BP08861 270 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 PRKCAP17252 672 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 GARTP22102 1010 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 POLR2BP30876 1174 aaKnown RBP5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 NCKAP1LP55160 1127 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 CYP4F8P98187 520 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 CWF19L2Q2TBE0 894 aaKnown RBP5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 BBS9Q3SYG4 887 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 HSF5Q4G112 596 aaPredicted RBP5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 ERICH6BQ5W0A0 696 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 FAM196AQ6ZSG2 479 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 FAM129CQ86XR2 697 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 VPS37DQ86XT2 251 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 AMOTL1Q8IY63 956 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 TSR2Q969E8 191 aaKnown RBP5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 PWWP2AQ96N64 755 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 FBXO9Q9UK97 447 aaPredicted RBP5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 EID1Q9Y6B2 187 aa5.55□□□□□ -1.52
SMARCA5-202ENST00000508573 NUDT19A8MXV4 375 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 IRS4O14654 1257 aaPredicted RBP5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 ATF4P18848 351 aaPredicted RBP5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 ERVFRD-1P60508 538 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 LAPTM5Q13571 262 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 DHX8Q14562 1220 aaKnown RBP5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 FBXL19Q6PCT2 694 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 TMC6Q7Z403 805 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 FERMT3Q86UX7 667 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 IGDCC3Q8IVU1 814 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 MKL1Q969V6 931 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 CRELD1Q96HD1 420 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 CHST7Q9NS84 486 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 SFMBT1Q9UHJ3 866 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 FBXL21Q9UKT6 434 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 GPR55Q9Y2T6 319 aaPredicted RBP5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 TAF6LQ9Y6J9 622 aa5.54□□□□□ -1.52
SMARCA5-202ENST00000508573 SIGLEC6O43699 453 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 BUB1BO60566 1050 aaPredicted RBP5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 CLEC3AO75596 197 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 LDHAP00338 332 aaKnown RBP5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 GNALP38405 381 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 GGNQ86UU5 652 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 NUP43Q8NFH3 380 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 FCRL2Q96LA5 508 aaPredicted RBP5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 APBA2Q99767 749 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 CDADC1Q9BWV3 514 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 ADAM7Q9H2U9 754 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 KANSL2Q9H9L4 492 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 COPRSQ9NQ92 184 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 KBTBD4Q9NVX7 518 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 GMIPQ9P107 970 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 NRBP1Q9UHY1 535 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 ROBO2Q9HCK4 1378 aa5.53□□□□□ -1.52
SMARCA5-202ENST00000508573 CFAP69A5D8W1 941 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 GJA8P48165 433 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 TMEM62Q0P6H9 643 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 MYBPC2Q14324 1141 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 WDR78Q5VTH9 848 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 NBPF6Q5VWK0 638 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 CDCP2Q5VXM1 449 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 CCSAPQ6IQ19 270 aaPredicted RBP5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 USP48Q86UV5 1035 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 SP8Q8IXZ3 490 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 CKAP2LQ8IYA6 745 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 LINC01356Q8N9X3 169 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 PRPF38AQ8NAV1 312 aaKnown RBP5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 ATG4CQ96DT6 458 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 NBPF4Q96M43 638 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 CHST12Q9NRB3 414 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 GFOD1Q9NXC2 390 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 MAP3K20Q9NYL2 800 aaKnown RBP5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 SWAP70Q9UH65 585 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 PCDHA5Q9Y5H7 936 aa5.52□□□□□ -1.53
SMARCA5-202ENST00000508573 A0A1W2PQ27 194 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 A0A1W2PQ45 241 aaPredicted RBP5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 A0A1W2PQ64 194 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 A0A1W2PQC6 194 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 A0A1W2PQD8 194 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 A0A1W2PQY0 241 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 ZNF500O60304 480 aaPredicted RBP5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 ATE1O95260 518 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 MCM4P33991 863 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 ITGAEP38570 1179 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 EIF4A3P38919 411 aaKnown RBP5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 PLP2Q04941 152 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 OVOS1Q6IE37 1185 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 GK5Q6ZS86 529 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 SRPK1Q96SB4 655 aaKnown RBP5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 MKRN2Q9H000 416 aaKnown RBP5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 CNNM2Q9H8M5 875 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 FANCLQ9NW38 375 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 ACSL6Q9UKU0 697 aa5.51□□□□□ -1.53
SMARCA5-202ENST00000508573 GREM1O60565 184 aa5.5□□□□□ -1.53
SMARCA5-202ENST00000508573 CDC45O75419 566 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms