RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 RGS22Q8NE09 1264 aa6.5□□□□□ -1.37
PDLIM5-211ENST00000508531 FBXO41Q8TF61 875 aa6.5□□□□□ -1.37
PDLIM5-211ENST00000508531 HAUS7Q99871 368 aa6.5□□□□□ -1.37
PDLIM5-211ENST00000508531 PCDHB10Q9UN67 800 aa6.5□□□□□ -1.37
PDLIM5-211ENST00000508531 EFR3BQ9Y2G0 817 aa6.5□□□□□ -1.37
PDLIM5-211ENST00000508531 A0A087WZG4 1122 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 ZBTB7CA1YPR0 619 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 SYN1P17600 705 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 IGFBP6P24592 240 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 L1CAMP32004 1257 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 COL9A2Q14055 689 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 SP8Q8IXZ3 490 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 TP53I13Q8NBR0 393 aaPredicted RBP6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 MCMBPQ9BTE3 642 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 KRTAP9-3Q9BYQ3 159 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 WHRNQ9P202 907 aa6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 DIS3Q9Y2L1 958 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-211ENST00000508531 EIF4G3O43432 1585 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 ZC3H12DA2A288 527 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 F8W031 263 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 STXBP3O00186 592 aa6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 SCAMP3O14828 347 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 VAMP4O75379 141 aa6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 EIF6P56537 245 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 CORO7P57737 925 aa6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 FGD4Q96M96 766 aa6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 DBR1Q9UK59 544 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
PDLIM5-211ENST00000508531 GAPVD1Q14C86 1478 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 A0A1W2PQH9 124 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 FFAR3O14843 346 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 AURKAO14965 403 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 FBLN1P23142 703 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 SOX9P48436 509 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 PRR5P85299 388 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 TARBP2Q15633 366 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 DPY19L1Q2PZI1 675 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 HEATR6Q6AI08 1181 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 RCSD1Q6JBY9 416 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 ADAT2Q7Z6V5 191 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 METTL16Q86W50 562 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 FAM9AQ8IZU1 332 aaPredicted RBP6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 CXorf38Q8TB03 319 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 KLHL25Q9H0H3 589 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 GBP3Q9H0R5 595 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 ADAM7Q9H2U9 754 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 PHAXQ9H814 394 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 RXFP1Q9HBX9 757 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 LUC7LQ9NQ29 371 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 LMTK3Q96Q04 1460 aa6.47□□□□□ -1.37
PDLIM5-211ENST00000508531 TDRD9Q8NDG6 1382 aaKnown RBP6.46□□□□□ -1.37
PDLIM5-211ENST00000508531 WIZO95785 1651 aa6.46□□□□□ -1.37
PDLIM5-211ENST00000508531 PLA2G1BP04054 148 aaKnown RBP6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 EPHX1P07099 455 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 ATF2P15336 505 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 MC3RP41968 323 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 GIPRP48546 466 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 SLC7A5Q01650 507 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 NLGN1Q8N2Q7 840 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 NLGN2Q8NFZ4 835 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 GPRASP2Q96D09 838 aa6.46□□□□□ -1.38
PDLIM5-211ENST00000508531 GLI4P10075 376 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 FOXO4P98177 505 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 EEF1DP3Q658K8 133 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 ADGRG2Q8IZP9 1017 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 KLHL6Q8WZ60 621 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 ALG3Q92685 438 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 SPATA32Q96LK8 384 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 BCAS3Q9H6U6 928 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 FBLN5Q9UBX5 448 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 CGGBP1Q9UFW8 167 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 SUSD2Q9UGT4 822 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 RWDD3Q9Y3V2 267 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 TOPBP1Q92547 1522 aa6.45□□□□□ -1.38
PDLIM5-211ENST00000508531 PPM1BO75688 479 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 VAMP1P23763 118 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 PPP2R5EQ16537 467 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 SKOR2Q2VWA4 1001 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 VWA3BQ502W6 1294 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 CPNE8Q86YQ8 564 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 C19orf47Q8N9M1 422 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 OR6P1Q8NGX9 317 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 RASGRP4Q8TDF6 673 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 FNIP1Q8TF40 1166 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 SUGT1Q9Y2Z0 365 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 BACE2Q9Y5Z0 518 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 PMF1-BGLAPU3KQ54 211 aa6.44□□□□□ -1.38
PDLIM5-211ENST00000508531 A0A1B0GTL3 188 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 C2orf71A6NGG8 1288 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 ASGR2P07307 311 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 NCAM1P13591 858 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 KCNC1P48547 511 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 SEPHS1P49903 392 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 SLURP1P55000 103 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 AMPD2Q01433 879 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 CAP1Q01518 475 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 C9orf131Q5VYM1 1079 aa6.43□□□□□ -1.38
PDLIM5-211ENST00000508531 CABP7Q86V35 215 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms