RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 ABLIM1O14639 778 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 N4BP3O15049 544 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 DDAH1O94760 285 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 ZNF143P52747 638 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 IGDCC3Q8IVU1 814 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 TRIM59Q8IWR1 403 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 NLGN2Q8NFZ4 835 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 MZB1Q8WU39 189 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 BTN2A2Q8WVV5 523 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 COPS5Q92905 334 aa7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 EPB41L4AQ9HCS5 686 aaPredicted RBP7.55□□□□□ -1.2
UBE2D3-225ENST00000508476 NPHP3-ACAD11A0A0J9YXS1 232 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 ZC3H12DA2A288 527 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 SRGAP3O43295 1099 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 SUSD5O60279 629 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 ITGAVP06756 1048 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 PLS3P13797 630 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 PAMP19021 973 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 MAPKAPK2P49137 400 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 CORO7P57737 925 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 ZNF200P98182 395 aaPredicted RBP7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 SV2CQ496J9 727 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 FBLN7Q53RD9 439 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 OLFML2BQ68BL8 750 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 CELF2-AS1Q8N7Q2 184 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 SIGLEC10Q96LC7 697 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 IRAK3Q9Y616 596 aa7.54□□□□□ -1.2
UBE2D3-225ENST00000508476 E9PSI1 815 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 IRS4O14654 1257 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 GJB6O95452 261 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 CYBBP04839 570 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 THBDP07204 575 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 GLI4P10075 376 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 NAT2P11245 290 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 NR1I3Q14994 352 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 LCE4AQ5TA78 99 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 ZC3H14Q6PJT7 736 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 PAQR3Q6TCH7 311 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 ZNF227Q86WZ6 799 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 TMEFF1Q8IYR6 380 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 MTA3Q9BTC8 594 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 ST7Q9NRC1 585 aa7.53□□□□□ -1.2
UBE2D3-225ENST00000508476 C7orf72A4D263 438 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 F8W031 263 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 PRR5P85299 388 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 TMEM62Q0P6H9 643 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 SF1Q15637 639 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 FXNQ16595 210 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 INF2Q27J81 1249 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 POMZP3Q6PJE2 187 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 AMIGO3Q86WK7 504 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 SLC43A3Q8NBI5 491 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 FRS2Q8WU20 508 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 NKX2-4Q9H2Z4 354 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 BCAS3Q9H6U6 928 aa7.52□□□□□ -1.21
UBE2D3-225ENST00000508476 ARNTLO00327 626 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 ANKS3Q6ZW76 656 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 SIAH1Q8IUQ4 282 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 CRACR2BQ8N4Y2 399 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 LZTR1Q8N653 840 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 NPLOC4Q8TAT6 608 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 DPF3Q92784 378 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 GMLQ99445 158 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 LRP2BPQ9P2M1 347 aa7.51□□□□□ -1.21
UBE2D3-225ENST00000508476 BUB1BO60566 1050 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-225ENST00000508476 FBLN1P23142 703 aa7.5□□□□□ -1.21
UBE2D3-225ENST00000508476 ZNF385BQ569K4 471 aa7.5□□□□□ -1.21
UBE2D3-225ENST00000508476 TMEFF2Q9UIK5 374 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-225ENST00000508476 IRS2Q9Y4H2 1338 aa7.5□□□□□ -1.21
UBE2D3-225ENST00000508476 NPHS1O60500 1241 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 FUCA1P04066 466 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 ECI1P42126 302 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 LIMS1P48059 325 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 PRSS53Q2L4Q9 553 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 VMACQ2NL98 169 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 FAM129CQ86XR2 697 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 CCDC103Q8IW40 242 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 DACT3Q96B18 629 aaPredicted RBP7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 MMP19Q99542 508 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 DBR1Q9UK59 544 aaKnown RBP7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 SIT1Q9Y3P8 196 aa7.49□□□□□ -1.21
UBE2D3-225ENST00000508476 TRBV23OR9-2A0A075B6M9 112 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 RFXAPO00287 272 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 KLF4O43474 513 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 SNRPB2P08579 225 aaKnown RBP7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 IGFBP6P24592 240 aaPredicted RBP7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 MC3RP41968 323 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 GRIA2P42262 883 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 SLC10A6Q3KNW5 377 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 USP33Q8TEY7 942 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 BTG4Q9NY30 223 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 MARCH2Q9P0N8 246 aa7.48□□□□□ -1.21
UBE2D3-225ENST00000508476 NTRK1P04629 796 aa7.47□□□□□ -1.21
UBE2D3-225ENST00000508476 ATF2P15336 505 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms