RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MAP4K2Q12851 820 aa2.57□□□□□ -2
SMN2-208ENST00000508258 GRB10Q13322 594 aa2.57□□□□□ -2
SMN2-208ENST00000508258 SF1Q15637 639 aaKnown RBP2.57□□□□□ -2
SMN2-208ENST00000508258 NTRK3Q16288 839 aa2.57□□□□□ -2
SMN2-208ENST00000508258 CLEC16AQ2KHT3 1053 aa2.57□□□□□ -2
SMN2-208ENST00000508258 RALGPS1Q5JS13 557 aa2.57□□□□□ -2
SMN2-208ENST00000508258 SLC35F1Q5T1Q4 408 aa2.57□□□□□ -2
SMN2-208ENST00000508258 GTF2IRD2BQ6EKJ0 949 aa2.57□□□□□ -2
SMN2-208ENST00000508258 POMZP3Q6PJE2 187 aa2.57□□□□□ -2
SMN2-208ENST00000508258 PRR23BQ6ZRT6 265 aa2.57□□□□□ -2
SMN2-208ENST00000508258 SYDE1Q6ZW31 735 aaPredicted RBP2.57□□□□□ -2
SMN2-208ENST00000508258 GTF2IRD2Q86UP8 949 aa2.57□□□□□ -2
SMN2-208ENST00000508258 FERMT3Q86UX7 667 aa2.57□□□□□ -2
SMN2-208ENST00000508258 CRACR2BQ8N4Y2 399 aaPredicted RBP2.57□□□□□ -2
SMN2-208ENST00000508258 PIWIL2Q8TC59 973 aaKnown RBP2.57□□□□□ -2
SMN2-208ENST00000508258 BTN2A2Q8WVV5 523 aa2.57□□□□□ -2
SMN2-208ENST00000508258 MYLIPQ8WY64 445 aa2.57□□□□□ -2
SMN2-208ENST00000508258 PPP1R14AQ96A00 147 aa2.57□□□□□ -2
SMN2-208ENST00000508258 CCDC140Q96MF4 163 aa2.57□□□□□ -2
SMN2-208ENST00000508258 IPO9Q96P70 1041 aaKnown RBP2.57□□□□□ -2
SMN2-208ENST00000508258 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
SMN2-208ENST00000508258 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
SMN2-208ENST00000508258 PRDM14Q9GZV8 571 aa2.57□□□□□ -2
SMN2-208ENST00000508258 MTFR1LQ9H019 292 aa2.57□□□□□ -2
SMN2-208ENST00000508258 ASCC2Q9H1I8 757 aaPredicted RBP2.57□□□□□ -2
SMN2-208ENST00000508258 NKX2-4Q9H2Z4 354 aa2.57□□□□□ -2
SMN2-208ENST00000508258 ADAMTS10Q9H324 1103 aa2.57□□□□□ -2
SMN2-208ENST00000508258 SLC52A2Q9HAB3 445 aa2.57□□□□□ -2
SMN2-208ENST00000508258 HOMER2Q9NSB8 354 aa2.57□□□□□ -2
SMN2-208ENST00000508258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.57□□□□□ -2
SMN2-208ENST00000508258 CGGBP1Q9UFW8 167 aaPredicted RBP2.57□□□□□ -2
SMN2-208ENST00000508258 TMEM59LQ9UK28 342 aa2.57□□□□□ -2
SMN2-208ENST00000508258 SUGT1Q9Y2Z0 365 aa2.57□□□□□ -2
SMN2-208ENST00000508258 PCDHB12Q9Y5F1 795 aa2.57□□□□□ -2
SMN2-208ENST00000508258 SSU72P8A0A1W2PR75 194 aa2.56□□□□□ -2
SMN2-208ENST00000508258 ALG1L2C9J202 215 aa2.56□□□□□ -2
SMN2-208ENST00000508258 NFIBO00712 420 aa2.56□□□□□ -2
SMN2-208ENST00000508258 EFCAB14O75071 495 aa2.56□□□□□ -2
SMN2-208ENST00000508258 LRRN2O75325 713 aa2.56□□□□□ -2
SMN2-208ENST00000508258 KCNH1O95259 989 aa2.56□□□□□ -2
SMN2-208ENST00000508258 ESR1P03372 595 aa2.56□□□□□ -2
SMN2-208ENST00000508258 S100BP04271 92 aaPredicted RBP2.56□□□□□ -2
SMN2-208ENST00000508258 ASLP04424 464 aa2.56□□□□□ -2
SMN2-208ENST00000508258 CNGA1P29973 690 aa2.56□□□□□ -2
SMN2-208ENST00000508258 HOXC12P31275 282 aa2.56□□□□□ -2
SMN2-208ENST00000508258 TRHRP34981 398 aaPredicted RBP2.56□□□□□ -2
SMN2-208ENST00000508258 ERVFC1P60507 584 aa2.56□□□□□ -2
SMN2-208ENST00000508258 NFKB2Q00653 900 aa2.56□□□□□ -2
SMN2-208ENST00000508258 SNW1Q13573 536 aaKnown RBP2.56□□□□□ -2
SMN2-208ENST00000508258 TESK1Q15569 626 aa2.56□□□□□ -2
SMN2-208ENST00000508258 BRDTQ58F21 947 aaPredicted RBP2.56□□□□□ -2
SMN2-208ENST00000508258 NOL9Q5SY16 702 aaKnown RBP2.56□□□□□ -2
SMN2-208ENST00000508258 CCDC181Q5TID7 509 aa2.56□□□□□ -2
SMN2-208ENST00000508258 DENND5AQ6IQ26 1287 aa2.56□□□□□ -2
SMN2-208ENST00000508258 NOL8Q76FK4 1167 aaKnown RBP2.56□□□□□ -2
SMN2-208ENST00000508258 DDX46Q7L014 1031 aaKnown RBP2.56□□□□□ -2
SMN2-208ENST00000508258 BRAPQ7Z569 592 aa2.56□□□□□ -2
SMN2-208ENST00000508258 FGD2Q7Z6J4 655 aa2.56□□□□□ -2
SMN2-208ENST00000508258 STRA8Q7Z7C7 330 aa2.56□□□□□ -2
SMN2-208ENST00000508258 ANKLE2Q86XL3 938 aa2.56□□□□□ -2
SMN2-208ENST00000508258 AHI1Q8N157 1196 aa2.56□□□□□ -2
SMN2-208ENST00000508258 PPM1KQ8N3J5 372 aa2.56□□□□□ -2
SMN2-208ENST00000508258 FIBCD1Q8N539 461 aa2.56□□□□□ -2
SMN2-208ENST00000508258 UBR7Q8N806 425 aa2.56□□□□□ -2
SMN2-208ENST00000508258 DTWD2Q8NBA8 298 aa2.56□□□□□ -2
SMN2-208ENST00000508258 TMEM145Q8NBT3 493 aa2.56□□□□□ -2
SMN2-208ENST00000508258 KREMEN2Q8NCW0 462 aa2.56□□□□□ -2
SMN2-208ENST00000508258 ADCY4Q8NFM4 1077 aa2.56□□□□□ -2
SMN2-208ENST00000508258 KCTD13Q8WZ19 329 aa2.56□□□□□ -2
SMN2-208ENST00000508258 COPS5Q92905 334 aa2.56□□□□□ -2
SMN2-208ENST00000508258 PTPRN2Q92932 1015 aa2.56□□□□□ -2
SMN2-208ENST00000508258 BRF1Q92994 677 aa2.56□□□□□ -2
SMN2-208ENST00000508258 SCLYQ96I15 445 aa2.56□□□□□ -2
SMN2-208ENST00000508258 Q96M66 194 aa2.56□□□□□ -2
SMN2-208ENST00000508258 TOX2Q96NM4 488 aa2.56□□□□□ -2
SMN2-208ENST00000508258 PPP1R16BQ96T49 567 aa2.56□□□□□ -2
SMN2-208ENST00000508258 EPB41L4BQ9H329 900 aa2.56□□□□□ -2
SMN2-208ENST00000508258 NOL6Q9H6R4 1146 aaKnown RBP2.56□□□□□ -2
SMN2-208ENST00000508258 DCP1AQ9NPI6 582 aaPredicted RBP2.56□□□□□ -2
SMN2-208ENST00000508258 CYP26B1Q9NR63 512 aa2.56□□□□□ -2
SMN2-208ENST00000508258 CHPF2Q9P2E5 772 aa2.56□□□□□ -2
SMN2-208ENST00000508258 SFMBT1Q9UHJ3 866 aa2.56□□□□□ -2
SMN2-208ENST00000508258 THRAP3Q9Y2W1 955 aaKnown RBP2.56□□□□□ -2
SMN2-208ENST00000508258 WASHC2CQ9Y4E1 1318 aa2.56□□□□□ -2
SMN2-208ENST00000508258 PHLDB1Q86UU1 1377 aa2.56□□□□□ -2
SMN2-208ENST00000508258 TCRBV16S1A1N1A0A5B0 115 aa2.55□□□□□ -2
SMN2-208ENST00000508258 BLACEA4D250 179 aa2.55□□□□□ -2
SMN2-208ENST00000508258 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.55□□□□□ -2
SMN2-208ENST00000508258 ARNTLO00327 626 aa2.55□□□□□ -2
SMN2-208ENST00000508258 SIGLEC6O43699 453 aa2.55□□□□□ -2
SMN2-208ENST00000508258 VAMP4O75379 141 aa2.55□□□□□ -2
SMN2-208ENST00000508258 CPP00450 1065 aa2.55□□□□□ -2
SMN2-208ENST00000508258 TMEM253P0C7T8 217 aa2.55□□□□□ -2
SMN2-208ENST00000508258 SRFP11831 508 aa2.55□□□□□ -2
SMN2-208ENST00000508258 KCNA6P17658 529 aa2.55□□□□□ -2
SMN2-208ENST00000508258 PCBP1Q15365 356 aaKnown RBP eCLIP2.55□□□□□ -2
SMN2-208ENST00000508258 DHCR24Q15392 516 aa2.55□□□□□ -2
SMN2-208ENST00000508258 CT47A1Q5JQC4 288 aaPredicted RBP2.55□□□□□ -2
SMN2-208ENST00000508258 ODR4Q5SWX8 454 aa2.55□□□□□ -2
SMN2-208ENST00000508258 STYK1Q6J9G0 422 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms