RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 HOXA7P31268 230 aaPredicted RBP12.54□□□□□ -0.4
PROM1-207ENST00000508167 ZNF76P36508 570 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 VEGFBP49765 207 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 CEBPZQ03701 1054 aaKnown RBP12.54□□□□□ -0.4
PROM1-207ENST00000508167 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
PROM1-207ENST00000508167 ALDH1A1P00352 501 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 HOXA13P31271 388 aaPredicted RBP12.53□□□□□ -0.4
PROM1-207ENST00000508167 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
PROM1-207ENST00000508167 TOB1P50616 345 aaPredicted RBP12.53□□□□□ -0.4
PROM1-207ENST00000508167 KCTD2Q14681 263 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 BARHL2Q9NY43 387 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 GCOM1H8Y6P7 765 aaPredicted RBP12.53□□□□□ -0.4
PROM1-207ENST00000508167 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 ICAM1P05362 532 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 POLR2MP0CAP2 368 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 HSPA6P17066 643 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 TYRO3Q06418 890 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 PKN1Q16512 942 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
PROM1-207ENST00000508167 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 HHIPL1Q96JK4 782 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 KCNF1Q9H3M0 494 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 SLC38A10Q9HBR0 1119 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 HPSEQ9Y251 543 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 IGF2BP3O00425 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
PROM1-207ENST00000508167 MYSM1Q5VVJ2 828 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 MCF2L2Q86YR7 1114 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 RABGAP1Q9Y3P9 1069 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 MYH4Q9Y623 1939 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 RASSF10A6NK89 507 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 BTBD18B2RXH4 712 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 KIF22Q14807 665 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 UBE2SQ16763 222 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 BLIDQ8IZY5 108 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
PROM1-207ENST00000508167 SPATC1LQ9H0A9 340 aa12.53□□□□□ -0.4
PROM1-207ENST00000508167 hCG_1984214I3L0E3 225 aa12.52□□□□□ -0.4
PROM1-207ENST00000508167 TMEM132BQ14DG7 1078 aa12.52□□□□□ -0.4
PROM1-207ENST00000508167 CAMK4Q16566 473 aa12.52□□□□□ -0.4
PROM1-207ENST00000508167 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.4
PROM1-207ENST00000508167 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.4
PROM1-207ENST00000508167 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.4
PROM1-207ENST00000508167 ZNF713Q8N859 430 aaPredicted RBP12.52□□□□□ -0.4
PROM1-207ENST00000508167 PTPN18Q99952 460 aa12.52□□□□□ -0.4
PROM1-207ENST00000508167 RANBP17Q9H2T7 1088 aaKnown RBP12.52□□□□□ -0.4
PROM1-207ENST00000508167 ABCB11O95342 1321 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 PLA2G6O60733 806 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 SF3A1Q15459 793 aaKnown RBP12.52□□□□□ -0.41
PROM1-207ENST00000508167 PIK3AP1Q6ZUJ8 805 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 GLT8D2Q9H1C3 349 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 ACAD9Q9H845 621 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 SLC35G1Q2M3R5 365 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 RNF207Q6ZRF8 634 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 EHMT1Q9H9B1 1298 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 DOCK1Q14185 1865 aa12.52□□□□□ -0.41
PROM1-207ENST00000508167 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 A0A1W2PQ27 194 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 A0A1W2PQ64 194 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 A0A1W2PQD8 194 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 ERCC3P19447 782 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 C11orf57Q6ZUT1 292 aaPredicted RBP12.51□□□□□ -0.41
PROM1-207ENST00000508167 TNFRSF25Q93038 417 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 HSD3B7Q9H2F3 369 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
PROM1-207ENST00000508167 FBXO40Q9UH90 709 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 STXBP3O00186 592 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 TBC1D8O95759 1140 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 ERVK-24P63145 666 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 LBX2Q6XYB7 198 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 NUP62CLQ9H1M0 184 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 CBX8Q9HC52 389 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 WNT7AO00755 349 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 NR5A1Q13285 461 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 DPP9Q86TI2 863 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 PLA2G4DQ86XP0 818 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 DHX40Q8IX18 779 aaKnown RBP12.51□□□□□ -0.41
PROM1-207ENST00000508167 BTBD7Q9P203 1132 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 ZKSCAN5Q9Y2L8 839 aa12.51□□□□□ -0.41
PROM1-207ENST00000508167 A0A087WWV3 80 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 MMP1P03956 469 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 NDUFA8P51970 172 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 UBXN2AP68543 259 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 MOV10L1Q9BXT6 1211 aaKnown RBP12.5□□□□□ -0.41
PROM1-207ENST00000508167 SH3GLB2Q9NR46 395 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 CFAP45Q9UL16 551 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 POTEB2H3BUK9 544 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 YEATS4O95619 227 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 MAP2K2P36507 400 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 CRHR2Q13324 411 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 CKAP2LQ8IYA6 745 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 EFCC1Q9HA90 598 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 GOLGA6L4A6NEF3 574 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 NFIBO00712 420 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 SLC25A27O95847 323 aa12.5□□□□□ -0.41
PROM1-207ENST00000508167 FCER1AP12319 257 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms