RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SMPD1P17405 629 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 ADD2P35612 726 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 GRB10Q13322 594 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 UBE3CQ15386 1083 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 ZKSCAN2Q63HK3 967 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 NOL8Q76FK4 1167 aaKnown RBP10.94□□□□□ -0.66
CAST-220ENST00000508117 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
CAST-220ENST00000508117 ARNTL2Q8WYA1 636 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 MKL1Q969V6 931 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 ACAD9Q9H845 621 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 RAVER2Q9HCJ3 691 aaKnown RBP10.94□□□□□ -0.66
CAST-220ENST00000508117 CD320Q9NPF0 282 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 ARPP21Q9UBL0 812 aaPredicted RBP10.94□□□□□ -0.66
CAST-220ENST00000508117 SCN10AQ9Y5Y9 1956 aa10.94□□□□□ -0.66
CAST-220ENST00000508117 TANC1Q9C0D5 1861 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 TNKSO95271 1327 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 COL4A4P53420 1690 aaPredicted RBP10.93□□□□□ -0.66
CAST-220ENST00000508117 FAM86C2PA6NEL3 165 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 BAIAP3O94812 1187 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 RASA1P20936 1047 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 CNTN2Q02246 1040 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 TKFCQ3LXA3 575 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 SBK1Q52WX2 424 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 VARS2Q5ST30 1063 aaKnown RBP10.93□□□□□ -0.66
CAST-220ENST00000508117 KRT40Q6A162 431 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 TAPT1Q6NXT6 567 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 HERC6Q8IVU3 1022 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.93□□□□□ -0.66
CAST-220ENST00000508117 C1orf115Q9H7X2 142 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 CERS4Q9HA82 394 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 A1CFQ9NQ94 594 aaKnown RBP10.93□□□□□ -0.66
CAST-220ENST00000508117 TET1Q8NFU7 2136 aa10.93□□□□□ -0.66
CAST-220ENST00000508117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.92□□□□□ -0.66
CAST-220ENST00000508117 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
CAST-220ENST00000508117 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 ALADP13716 330 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 MRE11P49959 708 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 PSMC6P62333 389 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 LEXMQ3ZCV2 418 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 DEFB128Q7Z7B8 93 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 FAM178BQ8IXR5 827 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 CLASRPQ8N2M8 674 aaKnown RBP10.92□□□□□ -0.66
CAST-220ENST00000508117 GMCL1P1Q8NEA9 526 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 RHPN1Q8TCX5 695 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 MORC4Q8TE76 937 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 DNAJC2Q99543 621 aaKnown RBP10.92□□□□□ -0.66
CAST-220ENST00000508117 VTA1Q9NP79 307 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 TRMT13Q9NUP7 481 aaKnown RBP10.92□□□□□ -0.66
CAST-220ENST00000508117 POLR3EQ9NVU0 708 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 PAG1Q9NWQ8 432 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 SLC4A4Q9Y6R1 1079 aa10.92□□□□□ -0.66
CAST-220ENST00000508117 LOC102724159A0A0B4J2E5 919 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 IQCF3P0C7M6 154 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 CYP2C9P11712 490 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 PTPN11Q06124 597 aaPredicted RBP10.91□□□□□ -0.66
CAST-220ENST00000508117 PWP2Q15269 919 aaKnown RBP10.91□□□□□ -0.66
CAST-220ENST00000508117 DUSP28Q4G0W2 176 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 NFRKBQ6P4R8 1299 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 GIMAP6Q6P9H5 292 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 GJD3Q8N144 294 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 SNX27Q96L92 541 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 IL1RAPL2Q9NP60 686 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 PDGFCQ9NRA1 345 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 CLIP2Q9UDT6 1046 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 COG6Q9Y2V7 657 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 PTPRSQ13332 1948 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 ZNF318Q5VUA4 2279 aa10.91□□□□□ -0.66
CAST-220ENST00000508117 ZNF536O15090 1300 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 C2orf72A6NCS6 295 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 PLA2G6O60733 806 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 BMP3P12645 472 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 CPT1AP50416 773 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 PURAQ00577 322 aaKnown RBP10.9□□□□□ -0.66
CAST-220ENST00000508117 NHLH1Q02575 133 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 BFSP2Q13515 415 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 LRRFIP1Q32MZ4 808 aaKnown RBP10.9□□□□□ -0.66
CAST-220ENST00000508117 PUS10Q3MIT2 529 aaKnown RBP10.9□□□□□ -0.66
CAST-220ENST00000508117 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 FAM160B2Q86V87 743 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 KIF1BPQ96EK5 621 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 UBE2ZQ9H832 354 aaPredicted RBP10.9□□□□□ -0.66
CAST-220ENST00000508117 MKNK2Q9HBH9 465 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 ZNF287Q9HBT7 754 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 HOMER2Q9NSB8 354 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 RNF146Q9NTX7 359 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 MTMR4Q9NYA4 1195 aa10.9□□□□□ -0.66
CAST-220ENST00000508117 LCTP09848 1927 aa10.9□□□□□ -0.67
CAST-220ENST00000508117 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.67
CAST-220ENST00000508117 SIP14410 1827 aa10.89□□□□□ -0.67
CAST-220ENST00000508117 TRIP12Q14669 1992 aaPredicted RBP10.89□□□□□ -0.67
CAST-220ENST00000508117 KPNA6O60684 536 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms